RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TRDNQ13061 729 aa19.01■□□□□ 0.63
SIN3B-201ENST00000248054 DCTN1Q14203 1278 aa19.01■□□□□ 0.63
SIN3B-201ENST00000248054 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
SIN3B-201ENST00000248054 NEUROD6Q96NK8 337 aa19.01■□□□□ 0.63
SIN3B-201ENST00000248054 ESPNB1AK53 854 aa19■□□□□ 0.63
SIN3B-201ENST00000248054 RAB11FIP3O75154 756 aa19■□□□□ 0.63
SIN3B-201ENST00000248054 NOL10Q9BSC4 688 aaKnown RBP19■□□□□ 0.63
SIN3B-201ENST00000248054 TMEM2Q9UHN6 1383 aa19■□□□□ 0.63
SIN3B-201ENST00000248054 AMOTL1Q8IY63 956 aa19■□□□□ 0.63
SIN3B-201ENST00000248054 FSD1Q9BTV5 496 aa19■□□□□ 0.63
SIN3B-201ENST00000248054 RBM42Q9BTD8 480 aaKnown RBP18.99■□□□□ 0.63
SIN3B-201ENST00000248054 MBIPQ9NS73 344 aa18.99■□□□□ 0.63
SIN3B-201ENST00000248054 MSH6P52701 1360 aa18.99■□□□□ 0.63
SIN3B-201ENST00000248054 KIF1BO60333 1816 aa18.99■□□□□ 0.63
SIN3B-201ENST00000248054 TRAK2O60296 914 aa18.99■□□□□ 0.63
SIN3B-201ENST00000248054 MAP7D2Q96T17 732 aa18.99■□□□□ 0.63
SIN3B-201ENST00000248054 R3HCC1Q9Y3T6 440 aaKnown RBP18.99■□□□□ 0.63
SIN3B-201ENST00000248054 HMGB2P26583 209 aaKnown RBP18.98■□□□□ 0.63
SIN3B-201ENST00000248054 DDX54Q8TDD1 881 aaKnown RBP18.98■□□□□ 0.63
SIN3B-201ENST00000248054 LARP1Q6PKG0 1096 aaKnown RBP18.98■□□□□ 0.63
SIN3B-201ENST00000248054 VPS37DQ86XT2 251 aa18.98■□□□□ 0.63
SIN3B-201ENST00000248054 ISY1Q9ULR0 285 aaKnown RBP18.97■□□□□ 0.63
SIN3B-201ENST00000248054 SRGAP3O43295 1099 aa18.97■□□□□ 0.63
SIN3B-201ENST00000248054 SMC3Q9UQE7 1217 aa18.97■□□□□ 0.63
SIN3B-201ENST00000248054 NPHP3Q7Z494 1330 aa18.97■□□□□ 0.63
SIN3B-201ENST00000248054 DBF4Q9UBU7 674 aaPredicted RBP18.97■□□□□ 0.63
SIN3B-201ENST00000248054 HYPKQ9NX55 129 aa18.97■□□□□ 0.63
SIN3B-201ENST00000248054 ZMYM4Q5VZL5 1548 aa18.97■□□□□ 0.63
SIN3B-201ENST00000248054 SF3A1Q15459 793 aaKnown RBP18.96■□□□□ 0.63
SIN3B-201ENST00000248054 SYNMO15061 1565 aa18.96■□□□□ 0.63
SIN3B-201ENST00000248054 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.96■□□□□ 0.63
SIN3B-201ENST00000248054 BLMP54132 1417 aaPredicted RBP18.96■□□□□ 0.63
SIN3B-201ENST00000248054 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
SIN3B-201ENST00000248054 AKAP17AQ02040 695 aaKnown RBP18.95■□□□□ 0.62
SIN3B-201ENST00000248054 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
SIN3B-201ENST00000248054 EFCAB6Q5THR3 1501 aa18.95■□□□□ 0.62
SIN3B-201ENST00000248054 ARHGAP31Q2M1Z3 1444 aa18.95■□□□□ 0.62
SIN3B-201ENST00000248054 SOS1Q07889 1333 aaPredicted RBP18.95■□□□□ 0.62
SIN3B-201ENST00000248054 HSP90AB2PQ58FF8 381 aa18.95■□□□□ 0.62
SIN3B-201ENST00000248054 MIS18AQ9NYP9 233 aa18.95■□□□□ 0.62
SIN3B-201ENST00000248054 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
SIN3B-201ENST00000248054 KIF1BPQ96EK5 621 aa18.94■□□□□ 0.62
SIN3B-201ENST00000248054 PDCL3Q9H2J4 239 aa18.94■□□□□ 0.62
SIN3B-201ENST00000248054 PLEKHH1Q9ULM0 1364 aa18.94■□□□□ 0.62
SIN3B-201ENST00000248054 STARD3NLO95772 234 aa18.94■□□□□ 0.62
SIN3B-201ENST00000248054 APPP05067 770 aa18.94■□□□□ 0.62
SIN3B-201ENST00000248054 IFNL2Q8IZJ0 200 aa18.94■□□□□ 0.62
SIN3B-201ENST00000248054 TBC1D2BQ9UPU7 963 aa18.94■□□□□ 0.62
SIN3B-201ENST00000248054 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
SIN3B-201ENST00000248054 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
SIN3B-201ENST00000248054 C19orf44Q9H6X5 657 aa18.93■□□□□ 0.62
SIN3B-201ENST00000248054 MYL6BP14649 208 aa18.93■□□□□ 0.62
SIN3B-201ENST00000248054 ANKRD24Q8TF21 1146 aa18.93■□□□□ 0.62
SIN3B-201ENST00000248054 RRAGDQ9NQL2 400 aaPredicted RBP18.93■□□□□ 0.62
SIN3B-201ENST00000248054 ABCA9Q8IUA7 1624 aa18.93■□□□□ 0.62
SIN3B-201ENST00000248054 CPLX1O14810 134 aa18.93■□□□□ 0.62
SIN3B-201ENST00000248054 HDAC1Q13547 482 aaPredicted RBP18.93■□□□□ 0.62
SIN3B-201ENST00000248054 CCDC158Q5M9N0 1113 aa18.93■□□□□ 0.62
SIN3B-201ENST00000248054 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
SIN3B-201ENST00000248054 ABCC3O15438 1527 aa18.92■□□□□ 0.62
SIN3B-201ENST00000248054 FLIIQ13045 1269 aa18.92■□□□□ 0.62
SIN3B-201ENST00000248054 GRPEL1Q9HAV7 217 aa18.92■□□□□ 0.62
SIN3B-201ENST00000248054 DNAAF4Q8WXU2 420 aa18.92■□□□□ 0.62
SIN3B-201ENST00000248054 CWC22Q9HCG8 908 aaKnown RBP18.92■□□□□ 0.62
SIN3B-201ENST00000248054 RALYLQ86SE5 291 aaKnown RBP18.92■□□□□ 0.62
SIN3B-201ENST00000248054 TRIM29Q14134 588 aa18.92■□□□□ 0.62
SIN3B-201ENST00000248054 CDC42BPBQ9Y5S2 1711 aa18.91■□□□□ 0.62
SIN3B-201ENST00000248054 CLCN1P35523 988 aa18.91■□□□□ 0.62
SIN3B-201ENST00000248054 FMNL2Q96PY5 1086 aa18.91■□□□□ 0.62
SIN3B-201ENST00000248054 WASHC4Q2M389 1173 aa18.91■□□□□ 0.62
SIN3B-201ENST00000248054 FOXD4L5Q5VV16 416 aaPredicted RBP18.91■□□□□ 0.62
SIN3B-201ENST00000248054 FOXD4L4Q8WXT5 416 aaPredicted RBP18.91■□□□□ 0.62
SIN3B-201ENST00000248054 KCNA6P17658 529 aa18.9■□□□□ 0.62
SIN3B-201ENST00000248054 GOLGA6L1Q8N7Z2 621 aa18.9■□□□□ 0.62
SIN3B-201ENST00000248054 MPRIPQ6WCQ1 1025 aa18.9■□□□□ 0.62
SIN3B-201ENST00000248054 TMOD3Q9NYL9 352 aa18.9■□□□□ 0.62
SIN3B-201ENST00000248054 ERICH2A1L162 156 aa18.89■□□□□ 0.61
SIN3B-201ENST00000248054 GOLGA6L19H0YKK7 550 aa18.89■□□□□ 0.61
SIN3B-201ENST00000248054 NEK4P51957 841 aa18.89■□□□□ 0.61
SIN3B-201ENST00000248054 ERVK-7P63135 1459 aa18.89■□□□□ 0.61
SIN3B-201ENST00000248054 CCDC57Q2TAC2 916 aa18.89■□□□□ 0.61
SIN3B-201ENST00000248054 PLEKHG3A1L390 1219 aa18.89■□□□□ 0.61
SIN3B-201ENST00000248054 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.61
SIN3B-201ENST00000248054 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.89■□□□□ 0.611e-6■■■□□ 18.5
SIN3B-201ENST00000248054 CIZ1Q9ULV3 898 aaPredicted RBP18.89■□□□□ 0.61
SIN3B-201ENST00000248054 AKAP4Q5JQC9 854 aa18.88■□□□□ 0.61
SIN3B-201ENST00000248054 MTERF4Q7Z6M4 381 aaKnown RBP18.88■□□□□ 0.61
SIN3B-201ENST00000248054 TEX13AQ9BXU3 409 aaPredicted RBP18.88■□□□□ 0.61
SIN3B-201ENST00000248054 PDCP20941 246 aa18.88■□□□□ 0.61
SIN3B-201ENST00000248054 SBNO1A3KN83 1393 aa18.88■□□□□ 0.61
SIN3B-201ENST00000248054 ANKRD1Q15327 319 aa18.88■□□□□ 0.61
SIN3B-201ENST00000248054 FAM83GA6ND36 823 aa18.87■□□□□ 0.61
SIN3B-201ENST00000248054 BABAM1Q9NWV8 329 aa18.87■□□□□ 0.61
SIN3B-201ENST00000248054 GLRX3O76003 335 aaKnown RBP18.87■□□□□ 0.61
SIN3B-201ENST00000248054 MX1P20591 662 aa18.87■□□□□ 0.61
SIN3B-201ENST00000248054 AACSQ86V21 672 aa18.87■□□□□ 0.61
SIN3B-201ENST00000248054 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
SIN3B-201ENST00000248054 DNAJC2Q99543 621 aaKnown RBP18.87■□□□□ 0.61
SIN3B-201ENST00000248054 CFAP65Q6ZU64 1925 aaKnown RBP18.87■□□□□ 0.61
SIN3B-201ENST00000248054 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms