RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
VPS18-201ENST00000220509 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
VPS18-201ENST00000220509 PPIP5K1Q6PFW1 1433 aa12.87□□□□□ -0.35
VPS18-201ENST00000220509 MADDQ8WXG6 1647 aa12.87□□□□□ -0.35
VPS18-201ENST00000220509 POLKQ9UBT6 870 aa12.87□□□□□ -0.35
VPS18-201ENST00000220509 MAP3K4Q9Y6R4 1608 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 TMEM2Q9UHN6 1383 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 HSP90AB2PQ58FF8 381 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 MYOM2P54296 1465 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 DIP2BQ9P265 1576 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 FAM83GA6ND36 823 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
VPS18-201ENST00000220509 MCM10Q7L590 875 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
VPS18-201ENST00000220509 USHBP1Q8N6Y0 703 aa12.85□□□□□ -0.35
VPS18-201ENST00000220509 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
VPS18-201ENST00000220509 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
VPS18-201ENST00000220509 RNF214Q8ND24 703 aa12.84□□□□□ -0.35
VPS18-201ENST00000220509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
VPS18-201ENST00000220509 ATF3P18847 181 aa12.84□□□□□ -0.35
VPS18-201ENST00000220509 TAF3Q5VWG9 929 aa12.84□□□□□ -0.35
VPS18-201ENST00000220509 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
VPS18-201ENST00000220509 KIF20AO95235 890 aa12.83□□□□□ -0.36
VPS18-201ENST00000220509 TRIM27P14373 513 aa12.83□□□□□ -0.36
VPS18-201ENST00000220509 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.36
VPS18-201ENST00000220509 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.36
VPS18-201ENST00000220509 PHF14O94880 888 aa12.83□□□□□ -0.36
VPS18-201ENST00000220509 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
VPS18-201ENST00000220509 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
VPS18-201ENST00000220509 ARHGAP31Q2M1Z3 1444 aa12.82□□□□□ -0.36
VPS18-201ENST00000220509 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
VPS18-201ENST00000220509 MROH1Q8NDA8 1641 aa12.82□□□□□ -0.36
VPS18-201ENST00000220509 RLBP1P12271 317 aa12.82□□□□□ -0.36
VPS18-201ENST00000220509 TNPO1Q92973 898 aaKnown RBP12.82□□□□□ -0.36
VPS18-201ENST00000220509 USP19O94966 1318 aa12.82□□□□□ -0.36
VPS18-201ENST00000220509 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
VPS18-201ENST00000220509 CWC22Q9HCG8 908 aaKnown RBP12.82□□□□□ -0.36
VPS18-201ENST00000220509 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
VPS18-201ENST00000220509 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
VPS18-201ENST00000220509 CAMSAP1Q5T5Y3 1602 aa12.81□□□□□ -0.36
VPS18-201ENST00000220509 GAS2L2Q8NHY3 880 aa12.81□□□□□ -0.36
VPS18-201ENST00000220509 NLRP2Q9NX02 1062 aa12.81□□□□□ -0.36
VPS18-201ENST00000220509 PHF8Q9UPP1 1060 aa12.81□□□□□ -0.36
VPS18-201ENST00000220509 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
VPS18-201ENST00000220509 A2ML1A8K2U0 1454 aa12.81□□□□□ -0.36
VPS18-201ENST00000220509 TNNT3P45378 269 aaPredicted RBP12.8□□□□□ -0.36
VPS18-201ENST00000220509 BANK1Q8NDB2 785 aa12.8□□□□□ -0.36
VPS18-201ENST00000220509 ROBO2Q9HCK4 1378 aa12.8□□□□□ -0.36
VPS18-201ENST00000220509 AIMP1Q12904 312 aaKnown RBP12.8□□□□□ -0.36
VPS18-201ENST00000220509 EP400NLQ6ZTU2 488 aa12.8□□□□□ -0.36
VPS18-201ENST00000220509 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
VPS18-201ENST00000220509 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
VPS18-201ENST00000220509 NINLQ9Y2I6 1382 aa12.8□□□□□ -0.36
VPS18-201ENST00000220509 KDM5AP29375 1690 aaKnown RBP12.8□□□□□ -0.36
VPS18-201ENST00000220509 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
VPS18-201ENST00000220509 GAS2L3Q86XJ1 694 aa12.79□□□□□ -0.36
VPS18-201ENST00000220509 LMTK2Q8IWU2 1503 aa12.79□□□□□ -0.36
VPS18-201ENST00000220509 SBNO2Q9Y2G9 1366 aa12.79□□□□□ -0.36
VPS18-201ENST00000220509 ST18O60284 1047 aa12.79□□□□□ -0.36
VPS18-201ENST00000220509 LETM1O95202 739 aaPredicted RBP12.79□□□□□ -0.36
VPS18-201ENST00000220509 TBX22Q9Y458 520 aa12.79□□□□□ -0.36
VPS18-201ENST00000220509 CLTCQ00610 1675 aaKnown RBP12.79□□□□□ -0.36
VPS18-201ENST00000220509 ABCC11Q96J66 1382 aa12.79□□□□□ -0.36
VPS18-201ENST00000220509 PRR36Q9H6K5 1346 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 UQCRHLA0A096LP55 91 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 UQCRHP07919 91 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 NSD2O96028 1365 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 VWDEQ8N2E2 1590 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 SSFA2P28290 1259 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
VPS18-201ENST00000220509 ZNF771Q7L3S4 317 aaPredicted RBP12.78□□□□□ -0.36
VPS18-201ENST00000220509 DDX17Q92841 729 aaKnown RBP12.78□□□□□ -0.36
VPS18-201ENST00000220509 ORAI2Q96SN7 254 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 ANTXR1Q9H6X2 564 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 ANO2Q9NQ90 1003 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
VPS18-201ENST00000220509 ANAPC15P60006 121 aa12.77□□□□□ -0.36
VPS18-201ENST00000220509 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.36
VPS18-201ENST00000220509 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.36
VPS18-201ENST00000220509 RAPGEF4Q8WZA2 1011 aa12.77□□□□□ -0.36
VPS18-201ENST00000220509 DEPDC5O75140 1603 aa12.77□□□□□ -0.36
VPS18-201ENST00000220509 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
VPS18-201ENST00000220509 SYNMO15061 1565 aa12.77□□□□□ -0.37
VPS18-201ENST00000220509 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
VPS18-201ENST00000220509 UBTFL1P0CB47 393 aaPredicted RBP12.76□□□□□ -0.37
VPS18-201ENST00000220509 CCDC30Q5VVM6 783 aa12.76□□□□□ -0.37
VPS18-201ENST00000220509 MTERF4Q7Z6M4 381 aaKnown RBP12.76□□□□□ -0.37
VPS18-201ENST00000220509 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
VPS18-201ENST00000220509 ZSCAN30Q86W11 494 aa12.76□□□□□ -0.37
VPS18-201ENST00000220509 PUS7Q96PZ0 661 aaKnown RBP12.76□□□□□ -0.37
VPS18-201ENST00000220509 GCC1Q96CN9 775 aa12.76□□□□□ -0.37
VPS18-201ENST00000220509 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
VPS18-201ENST00000220509 GLI2P10070 1586 aa12.75□□□□□ -0.37
VPS18-201ENST00000220509 REC8O95072 547 aa12.75□□□□□ -0.37
VPS18-201ENST00000220509 EIF4A2Q14240 407 aaKnown RBP12.75□□□□□ -0.37
VPS18-201ENST00000220509 SKOR2Q2VWA4 1001 aaPredicted RBP12.75□□□□□ -0.37
VPS18-201ENST00000220509 GPATCH3Q96I76 525 aa12.75□□□□□ -0.37
VPS18-201ENST00000220509 GTPBP4Q9BZE4 634 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms