RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MRE11P49959 708 aa21.48■■□□□ 1.03
USB1-201ENST00000219281 K7ELQ4 463 aaPredicted RBP21.47■■□□□ 1.03
USB1-201ENST00000219281 EIF5BO60841 1220 aaKnown RBP21.47■■□□□ 1.03
USB1-201ENST00000219281 GBP4Q96PP9 640 aa21.46■■□□□ 1.03
USB1-201ENST00000219281 GSPT1P15170 499 aaKnown RBP21.46■■□□□ 1.03
USB1-201ENST00000219281 ITSN1Q15811 1721 aa21.46■■□□□ 1.03
USB1-201ENST00000219281 PLEKHM2Q8IWE5 1019 aa21.45■■□□□ 1.02
USB1-201ENST00000219281 TOPAZ1Q8N9V7 1692 aa21.45■■□□□ 1.02
USB1-201ENST00000219281 USP6P35125 1406 aa21.45■■□□□ 1.02
USB1-201ENST00000219281 GRPEL1Q9HAV7 217 aa21.44■■□□□ 1.02
USB1-201ENST00000219281 DCTPP1Q9H773 170 aa21.44■■□□□ 1.02
USB1-201ENST00000219281 SSH2Q76I76 1423 aa21.43■■□□□ 1.02
USB1-201ENST00000219281 DLG5Q8TDM6 1919 aa21.43■■□□□ 1.02
USB1-201ENST00000219281 KCNA6P17658 529 aa21.43■■□□□ 1.02
USB1-201ENST00000219281 KIF24Q5T7B8 1368 aa21.42■■□□□ 1.02
USB1-201ENST00000219281 GAS2L2Q8NHY3 880 aa21.42■■□□□ 1.02
USB1-201ENST00000219281 NRKQ7Z2Y5 1582 aa21.42■■□□□ 1.02
USB1-201ENST00000219281 OVOS2A0A0J9YW53 1432 aa21.42■■□□□ 1.02
USB1-201ENST00000219281 OVOS2Q6IE36 1432 aa21.42■■□□□ 1.02
USB1-201ENST00000219281 KRT24Q2M2I5 525 aa21.41■■□□□ 1.02
USB1-201ENST00000219281 AEBP1Q8IUX7 1158 aa21.41■■□□□ 1.02
USB1-201ENST00000219281 C16orf71Q8IYS4 520 aaPredicted RBP21.41■■□□□ 1.02
USB1-201ENST00000219281 INTS3Q68E01 1043 aaKnown RBP21.41■■□□□ 1.02
USB1-201ENST00000219281 TTC22Q5TAA0 569 aa21.4■■□□□ 1.02
USB1-201ENST00000219281 SULT6B1Q6IMI4 303 aa21.4■■□□□ 1.02
USB1-201ENST00000219281 SKOR2Q2VWA4 1001 aaPredicted RBP21.39■■□□□ 1.02
USB1-201ENST00000219281 DIP2AQ14689 1571 aa21.39■■□□□ 1.01
USB1-201ENST00000219281 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.01
USB1-201ENST00000219281 SSFA2P28290 1259 aa21.39■■□□□ 1.01
USB1-201ENST00000219281 EIF4A2Q14240 407 aaKnown RBP21.39■■□□□ 1.01
USB1-201ENST00000219281 ANKRD44Q8N8A2 993 aa21.39■■□□□ 1.01
USB1-201ENST00000219281 ISY1Q9ULR0 285 aaKnown RBP21.39■■□□□ 1.01
USB1-201ENST00000219281 GAS2L3Q86XJ1 694 aa21.38■■□□□ 1.01
USB1-201ENST00000219281 PTMSP20962 102 aa21.37■■□□□ 1.01
USB1-201ENST00000219281 MCM10Q7L590 875 aa21.37■■□□□ 1.01
USB1-201ENST00000219281 OTUD7AQ8TE49 926 aaPredicted RBP21.37■■□□□ 1.01
USB1-201ENST00000219281 USP31Q70CQ4 1352 aa21.37■■□□□ 1.01
USB1-201ENST00000219281 XRN1Q8IZH2 1706 aaKnown RBP21.37■■□□□ 1.01
USB1-201ENST00000219281 CHL1O00533 1208 aa21.36■■□□□ 1.01
USB1-201ENST00000219281 HSP90AB2PQ58FF8 381 aa21.36■■□□□ 1.01
USB1-201ENST00000219281 CEP85Q6P2H3 762 aa21.35■■□□□ 1.01
USB1-201ENST00000219281 RPAP2Q8IXW5 612 aaPredicted RBP21.35■■□□□ 1.01
USB1-201ENST00000219281 NGDNQ8NEJ9 315 aaKnown RBP21.35■■□□□ 1.01
USB1-201ENST00000219281 RGS12O14924 1447 aa21.35■■□□□ 1.01
USB1-201ENST00000219281 RIMS1Q86UR5 1692 aaKnown RBP21.35■■□□□ 1.01
USB1-201ENST00000219281 APBB1O00213 710 aa21.35■■□□□ 1.01
USB1-201ENST00000219281 RABEP1Q15276 862 aa21.35■■□□□ 1.01
USB1-201ENST00000219281 ATP10DQ9P241 1426 aa21.35■■□□□ 1.01
USB1-201ENST00000219281 SMARCA5O60264 1052 aaPredicted RBP21.34■■□□□ 1.01
USB1-201ENST00000219281 USP26Q9BXU7 913 aa21.34■■□□□ 1.01
USB1-201ENST00000219281 RGPD8O14715 1765 aaPredicted RBP21.34■■□□□ 1.01
USB1-201ENST00000219281 SOX12O15370 315 aa21.34■■□□□ 1.01
USB1-201ENST00000219281 HAP1P54257 671 aaPredicted RBP21.34■■□□□ 1.01
USB1-201ENST00000219281 TTC21AQ8NDW8 1320 aa21.33■■□□□ 1.01
USB1-201ENST00000219281 CLCN1P35523 988 aa21.33■■□□□ 1.01
USB1-201ENST00000219281 ANKLE2Q86XL3 938 aa21.33■■□□□ 1.01
USB1-201ENST00000219281 MSH6P52701 1360 aa21.33■■□□□ 1
USB1-201ENST00000219281 MEIS3Q99687 375 aa21.32■■□□□ 1
USB1-201ENST00000219281 RTL1A6NKG5 1358 aa21.32■■□□□ 1
USB1-201ENST00000219281 SDSP20132 328 aa21.31■■□□□ 1
USB1-201ENST00000219281 GOLGA6L22H0YM25 854 aa21.31■■□□□ 1
USB1-201ENST00000219281 PEAK1Q9H792 1746 aa21.3■■□□□ 1
USB1-201ENST00000219281 BAG4O95429 457 aaKnown RBP21.3■■□□□ 1
USB1-201ENST00000219281 CLEC17AQ6ZS10 378 aa21.3■■□□□ 1
USB1-201ENST00000219281 PTPRCP08575 1304 aa21.3■■□□□ 1
USB1-201ENST00000219281 MAP3K19Q56UN5 1328 aa21.3■■□□□ 1
USB1-201ENST00000219281 KIAA0232Q92628 1395 aa21.3■■□□□ 1
USB1-201ENST00000219281 NALCNQ8IZF0 1738 aa21.3■■□□□ 1
USB1-201ENST00000219281 SLC4A2P04920 1241 aa21.29■■□□□ 1
USB1-201ENST00000219281 RBM33Q96EV2 1170 aaKnown RBP21.29■■□□□ 1
USB1-201ENST00000219281 MIS18AQ9NYP9 233 aa21.29■■□□□ 1
USB1-201ENST00000219281 CASC1Q6TDU7 716 aa21.28■■□□□ 1
USB1-201ENST00000219281 ANKARQ7Z5J8 1434 aa21.28■■□□□ 1
USB1-201ENST00000219281 PRKCSHP14314 528 aaPredicted RBP21.27■■□□□ 1
USB1-201ENST00000219281 DDX49Q9Y6V7 483 aaKnown RBP21.27■■□□□ 1
USB1-201ENST00000219281 ADAMTSL3P82987 1691 aa21.26■□□□□ 0.99
USB1-201ENST00000219281 ESPNB1AK53 854 aa21.25■□□□□ 0.99
USB1-201ENST00000219281 KLHL40Q2TBA0 621 aa21.25■□□□□ 0.99
USB1-201ENST00000219281 TRIM44Q96DX7 344 aaPredicted RBP21.25■□□□□ 0.99
USB1-201ENST00000219281 CRB1P82279 1406 aa21.25■□□□□ 0.99
USB1-201ENST00000219281 SLC4A10Q6U841 1118 aa21.25■□□□□ 0.99
USB1-201ENST00000219281 NAP1L5Q96NT1 182 aaPredicted RBP21.25■□□□□ 0.99
USB1-201ENST00000219281 ERBB4Q15303 1308 aa21.24■□□□□ 0.99
USB1-201ENST00000219281 NLRP6P59044 892 aa21.24■□□□□ 0.99
USB1-201ENST00000219281 NUCB2P80303 420 aa21.24■□□□□ 0.99
USB1-201ENST00000219281 MCTP1Q6DN14 999 aa21.24■□□□□ 0.99
USB1-201ENST00000219281 FOXO3O43524 673 aa21.24■□□□□ 0.99
USB1-201ENST00000219281 G2E3Q7L622 706 aa21.24■□□□□ 0.99
USB1-201ENST00000219281 F6X3S4 739 aa21.23■□□□□ 0.99
USB1-201ENST00000219281 ST18O60284 1047 aa21.22■□□□□ 0.99
USB1-201ENST00000219281 HMMRO75330 724 aa21.22■□□□□ 0.99
USB1-201ENST00000219281 PKP1Q13835 747 aa21.22■□□□□ 0.99
USB1-201ENST00000219281 NUTM2GQ5VZR2 741 aa21.22■□□□□ 0.99
USB1-201ENST00000219281 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
USB1-201ENST00000219281 CHD2O14647 1828 aaKnown RBP21.22■□□□□ 0.99
USB1-201ENST00000219281 SETD1BQ9UPS6 1966 aaKnown RBP21.22■□□□□ 0.99
USB1-201ENST00000219281 PIK3C2AO00443 1686 aa21.22■□□□□ 0.99
USB1-201ENST00000219281 CYP2E1P05181 493 aaPredicted RBP21.22■□□□□ 0.99
USB1-201ENST00000219281 TSPYL4Q9UJ04 414 aa21.22■□□□□ 0.99
USB1-201ENST00000219281 FMN2Q9NZ56 1722 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms