RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 KLHL40Q2TBA0 621 aa27.37■■□□□ 1.97
HTATSF1-201ENST00000218364 SIRT1Q96EB6 747 aa27.37■■□□□ 1.97
HTATSF1-201ENST00000218364 CCDC61Q9Y6R9 512 aa27.37■■□□□ 1.97
HTATSF1-201ENST00000218364 ESF1Q9H501 851 aaKnown RBP27.36■■□□□ 1.97
HTATSF1-201ENST00000218364 AKAP12Q02952 1782 aa27.36■■□□□ 1.97
HTATSF1-201ENST00000218364 KIAA0232Q92628 1395 aa27.36■■□□□ 1.97
HTATSF1-201ENST00000218364 C16orf71Q8IYS4 520 aaPredicted RBP27.35■■□□□ 1.97
HTATSF1-201ENST00000218364 CHL1O00533 1208 aa27.35■■□□□ 1.97
HTATSF1-201ENST00000218364 CEP85Q6P2H3 762 aa27.35■■□□□ 1.97
HTATSF1-201ENST00000218364 METP08581 1390 aa27.34■■□□□ 1.97
HTATSF1-201ENST00000218364 ERBB4Q15303 1308 aa27.34■■□□□ 1.97
HTATSF1-201ENST00000218364 NUCB2P80303 420 aa27.33■■□□□ 1.97
HTATSF1-201ENST00000218364 UBE2Q2Q8WVN8 375 aa27.33■■□□□ 1.97
HTATSF1-201ENST00000218364 TECPR2O15040 1411 aa27.33■■□□□ 1.97
HTATSF1-201ENST00000218364 CYP2E1P05181 493 aaPredicted RBP27.33■■□□□ 1.97
HTATSF1-201ENST00000218364 PTPRCP08575 1304 aa27.33■■□□□ 1.97
HTATSF1-201ENST00000218364 RTL1A6NKG5 1358 aa27.32■■□□□ 1.96
HTATSF1-201ENST00000218364 TRIM44Q96DX7 344 aaPredicted RBP27.31■■□□□ 1.96
HTATSF1-201ENST00000218364 NAP1L5Q96NT1 182 aaPredicted RBP27.31■■□□□ 1.96
HTATSF1-201ENST00000218364 SDSP20132 328 aa27.3■■□□□ 1.96
HTATSF1-201ENST00000218364 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.3■■□□□ 1.96
HTATSF1-201ENST00000218364 NCKAP5LQ9HCH0 1330 aa27.3■■□□□ 1.96
HTATSF1-201ENST00000218364 ITSN1Q15811 1721 aa27.3■■□□□ 1.96
HTATSF1-201ENST00000218364 OTUD7AQ8TE49 926 aaPredicted RBP27.3■■□□□ 1.96
HTATSF1-201ENST00000218364 PPP1R9BQ96SB3 815 aa27.3■■□□□ 1.96
HTATSF1-201ENST00000218364 EIF4A2Q14240 407 aaKnown RBP27.29■■□□□ 1.96
HTATSF1-201ENST00000218364 TXNDC2Q86VQ3 553 aa27.29■■□□□ 1.96
HTATSF1-201ENST00000218364 DDX49Q9Y6V7 483 aaKnown RBP27.29■■□□□ 1.96
HTATSF1-201ENST00000218364 CWC22Q9HCG8 908 aaKnown RBP27.29■■□□□ 1.96
HTATSF1-201ENST00000218364 MSH6P52701 1360 aa27.28■■□□□ 1.96
HTATSF1-201ENST00000218364 CCDC173Q0VFZ6 552 aa27.28■■□□□ 1.96
HTATSF1-201ENST00000218364 CASC1Q6TDU7 716 aa27.28■■□□□ 1.96
HTATSF1-201ENST00000218364 AEBP1Q8IUX7 1158 aa27.28■■□□□ 1.96
HTATSF1-201ENST00000218364 KRT24Q2M2I5 525 aa27.27■■□□□ 1.96
HTATSF1-201ENST00000218364 SULT6B1Q6IMI4 303 aa27.27■■□□□ 1.96
HTATSF1-201ENST00000218364 ZNF445P59923 1031 aa27.26■■□□□ 1.95
HTATSF1-201ENST00000218364 PRR36Q9H6K5 1346 aa27.25■■□□□ 1.95
HTATSF1-201ENST00000218364 NASPP49321 788 aaPredicted RBP27.24■■□□□ 1.95
HTATSF1-201ENST00000218364 MEIS3Q99687 375 aa27.24■■□□□ 1.95
HTATSF1-201ENST00000218364 ST18O60284 1047 aa27.23■■□□□ 1.95
HTATSF1-201ENST00000218364 REC8O95072 547 aa27.23■■□□□ 1.95
HTATSF1-201ENST00000218364 LMBRD1Q9NUN5 540 aa27.23■■□□□ 1.95
HTATSF1-201ENST00000218364 SMARCA5O60264 1052 aaPredicted RBP27.23■■□□□ 1.95
HTATSF1-201ENST00000218364 OSBPL3Q9H4L5 887 aa27.23■■□□□ 1.95
HTATSF1-201ENST00000218364 CRB1P82279 1406 aa27.23■■□□□ 1.95
HTATSF1-201ENST00000218364 MCM10Q7L590 875 aa27.22■■□□□ 1.95
HTATSF1-201ENST00000218364 RGPD1P0DJD0 1748 aa27.22■■□□□ 1.95
HTATSF1-201ENST00000218364 MCTP1Q6DN14 999 aa27.22■■□□□ 1.95
HTATSF1-201ENST00000218364 OVOS2A0A0J9YW53 1432 aa27.21■■□□□ 1.95
HTATSF1-201ENST00000218364 OVOS2Q6IE36 1432 aa27.21■■□□□ 1.95
HTATSF1-201ENST00000218364 TTC21BQ7Z4L5 1316 aa27.2■■□□□ 1.94
HTATSF1-201ENST00000218364 HMMRO75330 724 aa27.2■■□□□ 1.94
HTATSF1-201ENST00000218364 ERC2O15083 957 aa27.19■■□□□ 1.94
HTATSF1-201ENST00000218364 PKP1Q13835 747 aa27.18■■□□□ 1.94
HTATSF1-201ENST00000218364 SLC4A2P04920 1241 aa27.17■■□□□ 1.94
HTATSF1-201ENST00000218364 ANP32BQ92688 251 aaKnown RBP27.17■■□□□ 1.94
HTATSF1-201ENST00000218364 PEAK1Q9H792 1746 aa27.16■■□□□ 1.94
HTATSF1-201ENST00000218364 ZSCAN23Q3MJ62 389 aa27.16■■□□□ 1.94
HTATSF1-201ENST00000218364 NALCNQ8IZF0 1738 aa27.16■■□□□ 1.94
HTATSF1-201ENST00000218364 AK9Q5TCS8 1911 aa27.15■■□□□ 1.94
HTATSF1-201ENST00000218364 USP31Q70CQ4 1352 aa27.15■■□□□ 1.94
HTATSF1-201ENST00000218364 APBB1O00213 710 aa27.15■■□□□ 1.94
HTATSF1-201ENST00000218364 HDGFP51858 240 aaKnown RBP27.15■■□□□ 1.94
HTATSF1-201ENST00000218364 ZGPATQ8N5A5 531 aaKnown RBP27.15■■□□□ 1.94
HTATSF1-201ENST00000218364 ZDHHC9Q9Y397 364 aa27.15■■□□□ 1.94
HTATSF1-201ENST00000218364 CCT4P50991 539 aaKnown RBP27.14■■□□□ 1.94
HTATSF1-201ENST00000218364 PDE1AP54750 535 aa27.14■■□□□ 1.94
HTATSF1-201ENST00000218364 TOPAZ1Q8N9V7 1692 aa27.14■■□□□ 1.94
HTATSF1-201ENST00000218364 CAVIN1Q6NZI2 390 aaKnown RBP27.14■■□□□ 1.93
HTATSF1-201ENST00000218364 PLEKHG3A1L390 1219 aa27.13■■□□□ 1.93
HTATSF1-201ENST00000218364 HSP90AB2PQ58FF8 381 aa27.13■■□□□ 1.93
HTATSF1-201ENST00000218364 ZSCAN30Q86W11 494 aa27.13■■□□□ 1.93
HTATSF1-201ENST00000218364 ARHGEF10O15013 1369 aa27.12■■□□□ 1.93
HTATSF1-201ENST00000218364 ACEP12821 1306 aa27.12■■□□□ 1.93
HTATSF1-201ENST00000218364 ROBO2Q9HCK4 1378 aa27.11■■□□□ 1.93
HTATSF1-201ENST00000218364 USP6P35125 1406 aa27.11■■□□□ 1.93
HTATSF1-201ENST00000218364 SALL3Q9BXA9 1300 aa27.11■■□□□ 1.93
HTATSF1-201ENST00000218364 FER1L4A9Z1Z3 1794 aa27.1■■□□□ 1.93
HTATSF1-201ENST00000218364 CEBPAP49715 358 aaPredicted RBP27.1■■□□□ 1.93
HTATSF1-201ENST00000218364 G2E3Q7L622 706 aa27.1■■□□□ 1.93
HTATSF1-201ENST00000218364 HS1BP3Q53T59 392 aa27.09■■□□□ 1.93
HTATSF1-201ENST00000218364 PLPPR3Q6T4P5 718 aa27.09■■□□□ 1.93
HTATSF1-201ENST00000218364 NCLP19338 710 aaKnown RBP27.09■■□□□ 1.93
HTATSF1-201ENST00000218364 PRPF40AO75400 957 aaKnown RBP27.09■■□□□ 1.93
HTATSF1-201ENST00000218364 GPT2Q8TD30 523 aa27.09■■□□□ 1.93
HTATSF1-201ENST00000218364 GNAI2P04899 355 aa27.07■■□□□ 1.92
HTATSF1-201ENST00000218364 MCM2P49736 904 aa27.07■■□□□ 1.92
HTATSF1-201ENST00000218364 RRP9O43818 475 aaKnown RBP27.07■■□□□ 1.92
HTATSF1-201ENST00000218364 RBSNQ9H1K0 784 aa27.07■■□□□ 1.92
HTATSF1-201ENST00000218364 TSPYL4Q9UJ04 414 aa27.07■■□□□ 1.92
HTATSF1-201ENST00000218364 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
HTATSF1-201ENST00000218364 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.07■■□□□ 1.92
HTATSF1-201ENST00000218364 MAP3K19Q56UN5 1328 aa27.06■■□□□ 1.92
HTATSF1-201ENST00000218364 F6X3S4 739 aa27.06■■□□□ 1.92
HTATSF1-201ENST00000218364 PDLIM2Q96JY6 352 aa27.06■■□□□ 1.92
HTATSF1-201ENST00000218364 MIS18AQ9NYP9 233 aa27.06■■□□□ 1.92
HTATSF1-201ENST00000218364 MTHFSDQ2M296 383 aaKnown RBP27.06■■□□□ 1.92
HTATSF1-201ENST00000218364 TPM2P07951 284 aa27.05■■□□□ 1.92
HTATSF1-201ENST00000218364 SLC4A10Q6U841 1118 aa27.05■■□□□ 1.92
HTATSF1-201ENST00000218364 ESYT1Q9BSJ8 1104 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms