RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 TWISTNBQ3B726 338 aaPredicted RBP11.27□□□□□ -0.6
MTHFD1-201ENST00000216605 HOXC9P31274 260 aa11.27□□□□□ -0.61
MTHFD1-201ENST00000216605 BACH2Q9BYV9 841 aa11.27□□□□□ -0.61
MTHFD1-201ENST00000216605 C19orf44Q9H6X5 657 aa11.27□□□□□ -0.61
MTHFD1-201ENST00000216605 ATF7IPQ6VMQ6 1270 aa11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 TSPYL6Q8N831 410 aa11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 KRT28Q7Z3Y7 464 aa11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 MIS18AQ9NYP9 233 aa11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 TRIM27P14373 513 aa11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-201ENST00000216605 ADGRL3Q9HAR2 1447 aa11.25□□□□□ -0.61
MTHFD1-201ENST00000216605 XRN1Q8IZH2 1706 aaKnown RBP11.25□□□□□ -0.61
MTHFD1-201ENST00000216605 MVPQ14764 893 aaKnown RBP11.25□□□□□ -0.61
MTHFD1-201ENST00000216605 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
MTHFD1-201ENST00000216605 IGHDP01880 384 aa11.25□□□□□ -0.61
MTHFD1-201ENST00000216605 KCNH5Q8NCM2 988 aa11.25□□□□□ -0.61
MTHFD1-201ENST00000216605 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
MTHFD1-201ENST00000216605 SSH2Q76I76 1423 aa11.24□□□□□ -0.61
MTHFD1-201ENST00000216605 C8orf58Q8NAV2 365 aa11.24□□□□□ -0.61
MTHFD1-201ENST00000216605 RWDD1Q9H446 243 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-201ENST00000216605 TSPYL4Q9UJ04 414 aa11.24□□□□□ -0.61
MTHFD1-201ENST00000216605 ZC3H6P61129 1189 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-201ENST00000216605 DDX17Q92841 729 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-201ENST00000216605 DDX19BQ9UMR2 479 aa11.24□□□□□ -0.61
MTHFD1-201ENST00000216605 TOPAZ1Q8N9V7 1692 aa11.23□□□□□ -0.61
MTHFD1-201ENST00000216605 VAMP4O75379 141 aa11.23□□□□□ -0.61
MTHFD1-201ENST00000216605 TMEM57Q8N5G2 664 aa11.23□□□□□ -0.61
MTHFD1-201ENST00000216605 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
MTHFD1-201ENST00000216605 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
MTHFD1-201ENST00000216605 GCP02774 474 aa11.22□□□□□ -0.61
MTHFD1-201ENST00000216605 PCDHB15Q9Y5E8 787 aa11.22□□□□□ -0.61
MTHFD1-201ENST00000216605 CHD2O14647 1828 aaKnown RBP11.22□□□□□ -0.61
MTHFD1-201ENST00000216605 TMEM94Q12767 1356 aa11.22□□□□□ -0.61
MTHFD1-201ENST00000216605 KDM2BQ8NHM5 1336 aa11.22□□□□□ -0.61
MTHFD1-201ENST00000216605 ZNF142P52746 1687 aaPredicted RBP11.21□□□□□ -0.61
MTHFD1-201ENST00000216605 LRRC59Q96AG4 307 aaKnown RBP11.21□□□□□ -0.61
MTHFD1-201ENST00000216605 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
MTHFD1-201ENST00000216605 ARHGEF10O15013 1369 aa11.21□□□□□ -0.61
MTHFD1-201ENST00000216605 IP6K1Q92551 441 aa11.21□□□□□ -0.62
MTHFD1-201ENST00000216605 NECTIN2Q92692 538 aa11.21□□□□□ -0.62
MTHFD1-201ENST00000216605 NAP1L2Q9ULW6 460 aaPredicted RBP11.21□□□□□ -0.62
MTHFD1-201ENST00000216605 GNAT3A8MTJ3 354 aa11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 CSB-PGBD3P0DP91 1061 aa11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 IGSF1Q8N6C5 1336 aa11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 RRP9O43818 475 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 ZNF853P0CG23 659 aa11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 HSP90AA2PQ14568 343 aaPredicted RBP11.2□□□□□ -0.62
MTHFD1-201ENST00000216605 NALCNQ8IZF0 1738 aa11.19□□□□□ -0.62
MTHFD1-201ENST00000216605 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-201ENST00000216605 GSE1Q14687 1217 aa11.19□□□□□ -0.62
MTHFD1-201ENST00000216605 NBPF6Q5VWK0 638 aa11.19□□□□□ -0.62
MTHFD1-201ENST00000216605 NBPF4Q96M43 638 aa11.19□□□□□ -0.62
MTHFD1-201ENST00000216605 CABLES1Q8TDN4 633 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 CHL1O00533 1208 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 C1orf115Q9H7X2 142 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 PIK3C2AO00443 1686 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 MSH6P52701 1360 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 SLC4A10Q6U841 1118 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 ANKRD24Q8TF21 1146 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 STK31Q9BXU1 1019 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 NLRP2Q9NX02 1062 aa11.18□□□□□ -0.62
MTHFD1-201ENST00000216605 PEAK1Q9H792 1746 aa11.17□□□□□ -0.62
MTHFD1-201ENST00000216605 C1orf141Q5JVX7 400 aa11.17□□□□□ -0.62
MTHFD1-201ENST00000216605 ZNF530Q6P9A1 599 aaPredicted RBP11.17□□□□□ -0.62
MTHFD1-201ENST00000216605 TEFQ10587 303 aa11.16□□□□□ -0.62
MTHFD1-201ENST00000216605 PDZRN3Q9UPQ7 1066 aa11.16□□□□□ -0.62
MTHFD1-201ENST00000216605 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
MTHFD1-201ENST00000216605 C1orf167Q5SNV9 1468 aa11.16□□□□□ -0.62
MTHFD1-201ENST00000216605 PLEKHO1Q53GL0 409 aaPredicted RBP11.15□□□□□ -0.62
MTHFD1-201ENST00000216605 CHRNA2Q15822 529 aa11.15□□□□□ -0.62
MTHFD1-201ENST00000216605 NPHP3Q7Z494 1330 aa11.15□□□□□ -0.62
MTHFD1-201ENST00000216605 KIF24Q5T7B8 1368 aa11.15□□□□□ -0.62
MTHFD1-201ENST00000216605 ADRA2BP18089 450 aa11.15□□□□□ -0.63
MTHFD1-201ENST00000216605 ARHGEF25Q86VW2 580 aa11.15□□□□□ -0.63
MTHFD1-201ENST00000216605 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
MTHFD1-201ENST00000216605 EIF2S2P20042 333 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-201ENST00000216605 TAF7Q15545 349 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-201ENST00000216605 MPRIPQ6WCQ1 1025 aa11.14□□□□□ -0.63
MTHFD1-201ENST00000216605 NFKBIBQ15653 356 aa11.14□□□□□ -0.63
MTHFD1-201ENST00000216605 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
MTHFD1-201ENST00000216605 ARHGAP45Q92619 1136 aa11.14□□□□□ -0.63
MTHFD1-201ENST00000216605 MAP3K5Q99683 1374 aa11.14□□□□□ -0.63
MTHFD1-201ENST00000216605 IL17REQ8NFR9 667 aa11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 RTL1A6NKG5 1358 aa11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 KDRP35968 1356 aa11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 DLG5Q8TDM6 1919 aa11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 ZNF335Q9H4Z2 1342 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 BBXQ8WY36 941 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms