RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-221ENST00000641573 RUVBL2Q9Y230 463 aaKnown RBP13.01□□□□□ -0.33
PHGDH-221ENST00000641573 PIAS3Q9Y6X2 628 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 F5P12259 2224 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 TICRRQ7Z2Z1 1910 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 COL4A2P08572 1712 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 TRBV5-4A0A0C4DH59 114 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 GPR39O43194 453 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 OR1I1O60431 355 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 FOXD2O60548 495 aaPredicted RBP13□□□□□ -0.33
PHGDH-221ENST00000641573 RHOBTB1O94844 696 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 WISP3O95389 354 aaPredicted RBP13□□□□□ -0.33
PHGDH-221ENST00000641573 FAM107AO95990 144 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 EGFP01133 1207 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 BPGMP07738 259 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 NEFHP12036 1026 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 PKMP14618 531 aaKnown RBP13□□□□□ -0.33
PHGDH-221ENST00000641573 UGT1A6P19224 532 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 UGT1A1P22309 533 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 UGT1A4P22310 534 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 CA5AP35218 305 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 UGT1A3P35503 534 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 UGT1A5P35504 534 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 PPARGP37231 505 aaPredicted RBP13□□□□□ -0.33
PHGDH-221ENST00000641573 MMP12P39900 470 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 KIR2DL1P43626 348 aaPredicted RBP13□□□□□ -0.33
PHGDH-221ENST00000641573 NFATC2Q13469 925 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 PON2Q15165 354 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 GPR33Q49SQ1 333 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 FBXL19Q6PCT2 694 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF852Q6ZMS4 543 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 CCDC91Q7Z6B0 441 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 TBC1D1Q86TI0 1168 aaPredicted RBP13□□□□□ -0.33
PHGDH-221ENST00000641573 CENPLQ8N0S6 344 aaPredicted RBP13□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF75CPQ92670 426 aaPredicted RBP13□□□□□ -0.33
PHGDH-221ENST00000641573 CLDN23Q96B33 292 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 PLEKHG4BQ96PX9 1271 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 TTC1Q99614 292 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 NMRAL1Q9HBL8 299 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 GPAMQ9HCL2 828 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 DYRK4Q9NR20 520 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 HEBP1Q9NRV9 189 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 RAD18Q9NS91 495 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 SEMA4GQ9NTN9 838 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 CRLS1Q9UJA2 301 aa13□□□□□ -0.33
PHGDH-221ENST00000641573 RGSL1A5PLK6 1076 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 PLK4O00444 970 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 BIRC5O15392 142 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 SPINT1O43278 529 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 SYNCRIPO60506 623 aaKnown RBP12.99□□□□□ -0.33
PHGDH-221ENST00000641573 DNAJC6O75061 913 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 KLHL2O95198 593 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 ADRB3P13945 408 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 BGNP21810 368 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 ACRV1P26436 265 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 TARSP26639 723 aaKnown RBP12.99□□□□□ -0.33
PHGDH-221ENST00000641573 SUOXP51687 545 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 TIAL1Q01085 375 aaKnown RBP eCLIP12.99□□□□□ -0.33
PHGDH-221ENST00000641573 ELP6Q0PNE2 266 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 DLG1Q12959 904 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 CAMK2GQ13555 558 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-221ENST00000641573 TSNAXIP1Q2TAA8 658 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 TMEM196Q5HYL7 178 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 CTSL3PQ5NE16 218 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 FAM46CQ5VWP2 391 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 PRR23CQ6ZRP0 262 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 ERN2Q76MJ5 926 aaKnown RBP12.99□□□□□ -0.33
PHGDH-221ENST00000641573 CPLX4Q7Z7G2 160 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 PIM3Q86V86 326 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 NUDCD3Q8IVD9 361 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 TRIM42Q8IWZ5 723 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 NXPE1Q8N323 547 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 SPATA6LQ8N4H0 392 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF473Q8WTR7 871 aaKnown RBP12.99□□□□□ -0.33
PHGDH-221ENST00000641573 ULK4Q96C45 1275 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 NXNL1Q96CM4 212 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 SCYL1Q96KG9 808 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 BIRC8Q96P09 236 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 GPR78Q96P69 363 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 MECRQ9BV79 373 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 HDAC8Q9BY41 377 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 NSRP1Q9H0G5 558 aaKnown RBP12.99□□□□□ -0.33
PHGDH-221ENST00000641573 P2RY12Q9H244 342 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 FAM83DQ9H4H8 585 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 MANSC1Q9H8J5 431 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 POPDC3Q9HBV1 291 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 IGSF5Q9NSI5 407 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 CD84Q9UIB8 345 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 ITM2BQ9Y287 266 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 COMMD10Q9Y6G5 202 aa12.99□□□□□ -0.33
PHGDH-221ENST00000641573 SCN8AQ9UQD0 1980 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 AGAP14A8MT82 685 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 PSMD11O00231 422 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 PRMT5O14744 637 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 AREL1O15033 823 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ESR1P03372 595 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 APOA4P06727 396 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 LTA4HP09960 611 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms