RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 CENPNQ96H22 339 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-239ENST00000640463 TRIB3Q96RU7 358 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 DERL2Q9GZP9 239 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 TLR8Q9NR97 1041 aaKnown RBP13.84□□□□□ -0.19
SPIN3-239ENST00000640463 HCSTQ9UBK5 93 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 SQORQ9Y6N5 450 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 ANKRD36A6QL64 1941 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 GBF1Q92538 1859 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 LCHNA4D1U4 455 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 ACOX3O15254 700 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 FOXD2O60548 495 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-239ENST00000640463 OR4F21O95013 312 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 C1RP00736 705 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 HOXD9P28356 352 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-239ENST00000640463 STT3AP46977 705 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 RSPO2Q6UXX9 243 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-239ENST00000640463 CHST15Q7LFX5 561 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-239ENST00000640463 TRPV3Q8NET8 790 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 LPCAT1Q8NF37 534 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 EEF1AKMT1Q8WVE0 214 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 ITFG2Q969R8 447 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.84□□□□□ -0.197e-6■■■■■ 27.5
SPIN3-239ENST00000640463 FUBP3Q96I24 572 aaKnown RBP eCLIP13.84□□□□□ -0.19
SPIN3-239ENST00000640463 ZNF599Q96NL3 588 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 DCUN1D5Q9BTE7 237 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 NLE1Q9NVX2 485 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-239ENST00000640463 FKBPLQ9UIM3 349 aa13.84□□□□□ -0.19
SPIN3-239ENST00000640463 CCDC154A6NI56 674 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 TLR5O60602 858 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 RPS17P08708 135 aaKnown RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 YAP1P46937 504 aaKnown RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 PLCL1Q15111 1095 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 ATP6AP1Q15904 470 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 PYCR3Q53H96 274 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 INTS11Q5TA45 600 aaKnown RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 SLC2A7Q6PXP3 512 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 MFSD2AQ8NA29 543 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 OR52B6Q8NGF0 335 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 CINPQ9BW66 212 aaPredicted RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 GPR62Q9BZJ7 368 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 POPDC3Q9HBV1 291 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 AIG1Q9NVV5 245 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 GALNT8Q9NY28 637 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 PCTPQ9UKL6 214 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 CDC14AQ9UNH5 594 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 ZFP37Q9Y6Q3 630 aaPredicted RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 F5H5T6 163 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 SNX2O60749 519 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 SLC22A3O75751 556 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 YBEYP58557 167 aaPredicted RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 TNK2Q07912 1038 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 DSC1Q08554 894 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 GPR141Q7Z602 305 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 DRAXINQ8NBI3 349 aaPredicted RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 HM13Q8TCT9 377 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 VPS50Q96JG6 964 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 BIRC8Q96P09 236 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 FAM193BQ96PV7 902 aaPredicted RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 C9orf16Q9BUW7 83 aa13.83□□□□□ -0.2
SPIN3-239ENST00000640463 LAMA2P24043 3122 aaKnown RBP13.83□□□□□ -0.2
SPIN3-239ENST00000640463 CLOCKO15516 846 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 ADAMTS4O75173 837 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 SNAP29O95721 258 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 EPOP01588 193 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 MYF6P23409 242 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 POLR2JP52435 117 aaKnown RBP13.82□□□□□ -0.2
SPIN3-239ENST00000640463 GNA12Q03113 381 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 DUSP4Q13115 394 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 RCAN2Q14206 197 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 SLC36A3Q495N2 470 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 NANOGP8Q6NSW7 305 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 TBPL2Q6SJ96 375 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 ERI1Q8IV48 349 aaKnown RBP13.82□□□□□ -0.2
SPIN3-239ENST00000640463 FNDC5Q8NAU1 212 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 LINC01599Q8WXQ3 324 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 LINGO1Q96FE5 620 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 RPF2Q9H7B2 306 aaKnown RBP13.82□□□□□ -0.2
SPIN3-239ENST00000640463 NANOGQ9H9S0 305 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 INTS10Q9NVR2 710 aaKnown RBP13.82□□□□□ -0.2
SPIN3-239ENST00000640463 CD274Q9NZQ7 290 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 HACD3Q9P035 362 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 EVLQ9UI08 416 aaPredicted RBP13.82□□□□□ -0.2
SPIN3-239ENST00000640463 TCRBV5S2A0A599 114 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 SYNCRIPO60506 623 aaKnown RBP13.82□□□□□ -0.2
SPIN3-239ENST00000640463 BMP10O95393 424 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 PRLP01236 227 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 OR4D2P58180 307 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 ZRANB3Q5FWF4 1079 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 RNF19BQ6ZMZ0 732 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 TIMMDC1Q9NPL8 285 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 FADS3Q9Y5Q0 445 aa13.82□□□□□ -0.2
SPIN3-239ENST00000640463 NT5C1B-RDH14C9J2C7 533 aa13.81□□□□□ -0.2
SPIN3-239ENST00000640463 SCAMP3O14828 347 aaKnown RBP13.81□□□□□ -0.2
SPIN3-239ENST00000640463 ESRRBO95718 433 aa13.81□□□□□ -0.2
SPIN3-239ENST00000640463 TSPAN12O95859 305 aa13.81□□□□□ -0.2
SPIN3-239ENST00000640463 IGLV3-27P01718 113 aa13.81□□□□□ -0.2
SPIN3-239ENST00000640463 PRR35P0CG20 571 aa13.81□□□□□ -0.2
SPIN3-239ENST00000640463 HOXB8P17481 243 aaPredicted RBP13.81□□□□□ -0.2
SPIN3-239ENST00000640463 CCND3P30281 292 aaPredicted RBP13.81□□□□□ -0.2
SPIN3-239ENST00000640463 MC4RP32245 332 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms