RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 NSL1Q96IY1 281 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 CCDC106Q9BWC9 280 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 ERVK-6Q9BXR3 956 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 SHCBP1LQ9BZQ2 653 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 RASSF4Q9H2L5 321 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 ZFP14Q9HCL3 533 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 DKK3Q9UBP4 350 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 RNF112Q9ULX5 631 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 DHRS7Q9Y394 339 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 LAMA3Q16787 3333 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 DOCK8Q8NF50 2099 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 SYCE1LA8MT33 242 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 IQCF5A8MTL0 148 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 CDC7O00311 574 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 BTN3A1O00481 513 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 NFKBIAP25963 317 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 ARHGEF7Q14155 803 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 ZNF805Q5CZA5 627 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 SH2D4BQ5SQS7 431 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 RFLNAQ6ZTI6 216 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 RAB44Q7Z6P3 723 aaPredicted RBP12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 TREML1Q86YW5 311 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 ZNF366Q8N895 744 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 PTGR2Q8N8N7 351 aaPredicted RBP12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 HCAR2Q8TDS4 363 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 FUBP1Q96AE4 644 aaKnown RBP12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 EML4Q9HC35 981 aaKnown RBP12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 PKD2L2Q9NZM6 624 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 PLA2G4CQ9UP65 541 aa12.14□□□□□ -0.47
CACNA1D-228ENST00000638120 PLXNA2O75051 1894 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 NPEPPSL1A6NEC2 478 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 PRR5-ARHGAP8B1AHC4 643 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 SUPT3HB4E1H0 165 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 SUPT3HO75486 399 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 HNRNPLP14866 589 aaKnown RBP eCLIP12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 TIMP2P16035 220 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 AOC1P19801 751 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 PTPN4P29074 926 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 ARHGAP8P85298 464 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 KDSRQ06136 332 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 FCHO2Q0JRZ9 810 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 ATP13A5Q4VNC0 1218 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 UNC50Q53HI1 259 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 METTL21CQ5VZV1 264 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 FBXW10Q5XX13 1052 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 MACC1Q6ZN28 852 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 RPS27LQ71UM5 84 aaKnown RBP12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 CUZD1Q86UP6 607 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 KIRREL3Q8IZU9 778 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 PHTF2Q8N3S3 785 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 CPA6Q8N4T0 437 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 TERB1Q8NA31 727 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 ST13P5Q8NFI4 369 aaPredicted RBP12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 LKAAEAR1Q8TD35 194 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 EEF1AKMT1Q8WVE0 214 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 PDLIM5Q96HC4 596 aaKnown RBP12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 SARS2Q9NP81 518 aaKnown RBP12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 PCDH12Q9NPG4 1184 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 TCF7L2Q9NQB0 619 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 ZDHHC3Q9NYG2 299 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 GTSE1Q9NYZ3 720 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 PRSS21Q9Y6M0 314 aa12.13□□□□□ -0.47
CACNA1D-228ENST00000638120 IGLV3-16A0A075B6K0 115 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 ECI2O75521 394 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 SUPT7LO94864 414 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 KRT16P08779 473 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 ESRRAP11474 423 aaPredicted RBP12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 GFAPP14136 432 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 DCDC1P59894 354 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 ELF3P78545 371 aaPredicted RBP12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 UBAP2LQ14157 1087 aaKnown RBP12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 PDCD2Q16342 344 aaPredicted RBP12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 PFKFB4Q16877 469 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 FNDC3BQ53EP0 1204 aaKnown RBP12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 FBXO39Q8N4B4 442 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 CLDN19Q8N6F1 224 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 ULK4Q96C45 1275 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 TIFAQ96CG3 184 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 FAR2Q96K12 515 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 RAB3IPQ96QF0 476 aaPredicted RBP12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 OR52B2Q96RD2 323 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 NUF2Q9BZD4 464 aa12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 NFKBIL1Q9UBC1 381 aaPredicted RBP12.12□□□□□ -0.47
CACNA1D-228ENST00000638120 TMEM233B4DJY2 109 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 STX16-NPEPL1H3BU86 382 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 STX16O14662 325 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 KLK8O60259 260 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 SIX3O95343 332 aaPredicted RBP12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 PRNPP04156 253 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 JUNP05412 331 aaKnown RBP12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 ENO1P06733 434 aaKnown RBP12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 OPRD1P41143 372 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 NSG1P42857 185 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 RALGDSQ12967 914 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 RUNX3Q13761 415 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 HNRNPA1L2Q32P51 320 aaKnown RBP12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 CYB5D1Q6P9G0 228 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
CACNA1D-228ENST00000638120 DPPA4Q7L190 304 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms