RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZNF613Q6PF04 617 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ECHDC2Q86YB7 292 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 COX18Q8N8Q8 333 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF709Q8N972 641 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TRPM4Q8TD43 1214 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 MFSD14AQ96MC6 490 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZSWIM3Q96MP5 696 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SPATA13Q96N96 652 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TBL1XR1Q9BZK7 514 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PCDH18Q9HCL0 1135 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 FBXO6Q9NRD1 293 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PCDHB16Q9NRJ7 776 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CFAP97Q9P2B7 532 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 FBXW2Q9UKT8 454 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PLK4O00444 970 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PIGNO95427 931 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 LGALS2P05162 132 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ACVR2AP27037 513 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 DGKEP52429 567 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CRYBB1P53674 252 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 MAPK12P53778 367 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PNLIPRP1P54315 467 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 C2orf80Q0P641 193 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CRHR2Q13324 411 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 STRADAQ7RTN6 431 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 KATNAL2Q8IYT4 538 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PTGR2Q8N8N7 351 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ARNTL2Q8WYA1 636 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SLC39A3Q9BRY0 314 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ABCB10Q9NRK6 738 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ETNK2Q9NVF9 386 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 DNAAF2Q9NVR5 837 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 STOX2Q9P2F5 926 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ATXN10Q9UBB4 475 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 DNAJC5BQ9UF47 199 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CIDEBQ9UHD4 219 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 BAIAP2Q9UQB8 552 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 A0A1B0GVC2 190 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 MPZL2O60487 215 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 GYPCP04921 128 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TACSTD2P09758 323 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CDK9P50750 372 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 XIAPP98170 497 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SLC34A1Q06495 639 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ST3GAL1Q11201 340 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 RUNDC3AQ59EK9 446 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SV2AQ7L0J3 742 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 REXO1L1PQ8IX06 675 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TMEM156Q8N614 296 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 VANGL1Q8TAA9 524 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 STRA6Q9BX79 667 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 NIFKQ9BYG3 293 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZCCHC17Q9NP64 241 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ARL5AQ9Y689 179 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 GLI2P10070 1586 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 E5RJQ4 531 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 JMJD7P0C870 316 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PTPRAP18433 802 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PTX3P26022 381 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 DUSP4Q13115 394 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF234Q14588 700 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF792Q3KQV3 632 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 GCNT6Q5T4J0 391 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 VITQ6UXI7 678 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ARCQ7LC44 396 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SPATA19Q7Z5L4 167 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SDR16C5Q8N3Y7 309 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 MINDY2Q8NBR6 621 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SLAIN1Q8ND83 568 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PRCCQ92733 491 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 KLHL5Q96PQ7 755 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TCF7L1Q9HCS4 588 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 NAALADL1Q9UQQ1 740 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ILVBLA1L0T0 632 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 FADS2P1A8MWK0 482 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SLC30A4O14863 429 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 OR1F1O43749 312 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PEX11AO75192 247 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SYNGR4O95473 234 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TRUB2O95900 331 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PDYNP01213 254 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 HRGP04196 525 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SPATA31D3P0C874 917 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 MIPP30301 263 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF311Q5JNZ3 666 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 BEND4Q6ZU67 534 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SPATA31D4Q6ZUB0 917 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 C3orf67Q6ZVT6 689 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CHERPQ8IWX8 916 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 GHDCQ8N2G8 530 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 PDPRQ8NCN5 879 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 RDH11Q8TC12 318 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SHC3Q92529 594 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SLC22A18Q96BI1 424 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF285Q96NJ3 590 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 KXD1Q9BQD3 176 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 METTL8Q9H825 291 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TMBIM4Q9HC24 238 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF490Q9ULM2 529 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 DNMT3AQ9Y6K1 912 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms