RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TIGD2Q4W5G0 525 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 FBXO48Q5FWF7 155 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 XKR7Q5GH72 579 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 EGFLAMQ63HQ2 1017 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 FAM171BQ6P995 826 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 SLC22A17Q8WUG5 538 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 TMBIM1Q969X1 311 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 ING2Q9H160 280 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 TRNAU1APQ9NX07 287 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 MIOSQ9NXC5 875 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 IKZF3Q9UKT9 509 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 C1orf232A0A0U1RR37 186 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 CD3EAPO15446 510 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 KERAO60938 352 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 CRCPO75575 148 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 ZBTB7AO95365 584 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 GLP2RO95838 553 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 ALDH2P05091 517 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 ENO2P09104 434 aaPredicted RBP19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 THRBP10828 461 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 CRYBB1P53674 252 aaPredicted RBP19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 FBXO39Q8N4B4 442 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 GPR150Q8NGU9 434 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 DCPSQ96C86 337 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 NRBF2Q96F24 287 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 HMCESQ96FZ2 354 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 NSMCE2Q96MF7 247 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 ZNF599Q96NL3 588 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 GAD1Q99259 594 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 PAAF1Q9BRP4 392 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 ABCC13Q9NSE7 274 aa19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 UXTQ9UBK9 157 aaPredicted RBP19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 MAGED1Q9Y5V3 778 aaPredicted RBP19.43■□□□□ 0.7
PDLIM3-212ENST00000620787 RPS17P08708 135 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 HAPLN1P10915 354 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 HOXB8P17481 243 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 GSTM2P28161 218 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 PRDX3P30048 256 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 PLA2G16P53816 162 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 ITGADQ13349 1161 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 BFSP2Q13515 415 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 TIGD5Q53EQ6 642 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 RBM48Q5RL73 367 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 MARC1Q5VT66 337 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 GLYATQ6IB77 296 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 R3HCC1LQ7Z5L2 792 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 KIAA1191Q96A73 305 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 TADA1Q96BN2 335 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 LRRC3Q9BY71 257 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 AGO3Q9H9G7 860 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 NUDT5Q9UKK9 219 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 TTC3P53804 2025 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 CCDC162PA2VCL2 907 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 IL7RP16871 459 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 FUT4P22083 530 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 NRG1Q02297 640 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 MFSD10Q14728 455 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 CYP2A13Q16696 494 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 THAP5Q7Z6K1 395 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 SYVN1Q86TM6 617 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 SPARTQ8N0X7 666 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 UMODL1-AS1Q8N2C9 162 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 OR2T11Q8NH01 316 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 AARSD1Q9BTE6 412 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 NUSAP1Q9BXS6 441 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 RAD21L1Q9H4I0 556 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 SEPT3Q9UH03 358 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 ZNF225Q9UK10 706 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 PCDHB3Q9Y5E6 796 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 ARL5AQ9Y689 179 aa19.42■□□□□ 0.7
PDLIM3-212ENST00000620787 THP07101 528 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 RXRGP48443 463 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 SKIV2LQ15477 1246 aaKnown RBP19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 PIK3R6Q5UE93 754 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 ANKS6Q68DC2 871 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 SCIMPQ6UWF3 145 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 TFAP2DQ7Z6R9 452 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 RALGPS2Q86X27 583 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 ARRDC2Q8TBH0 407 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 FATE1Q969F0 183 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 FKBP10Q96AY3 582 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 TMEM209Q96SK2 561 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 BEGAINQ9BUH8 593 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 FNIP2Q9P278 1114 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 MAGEL2Q9UJ55 1249 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 RNF112Q9ULX5 631 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 LOC285095A0A1B0GVY8 99 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 FAM234BA2RU67 622 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 CASTOR2A6NHX0 329 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 DEAF1O75398 565 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 ECI2O75521 394 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 HTR1AP08908 422 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 ILF2Q12905 390 aaKnown RBP19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 AQP6Q13520 282 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 IQSEC1Q6DN90 963 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 MRNIPQ6NTE8 343 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 SLC2A7Q6PXP3 512 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 SCD5Q86SK9 330 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 HID1Q8IV36 788 aa19.41■□□□□ 0.7
PDLIM3-212ENST00000620787 PGBD5Q8N414 524 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms