RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 NCDNQ9UBB6 729 aa15.46■□□□□ 0.07
PCDHGC3-204ENST00000617222 KLQ9UEF7 1012 aa15.46■□□□□ 0.07
PCDHGC3-204ENST00000617222 PROB1E7EW31 1015 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 CDK14O94921 469 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF8P17098 575 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 MCM3P25205 808 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 AKT1P31749 480 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 PPARGP37231 505 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 SRP54P61011 504 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 NHLH1Q02575 133 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 SPEM2Q0P670 501 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 GRIK2Q13002 908 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 FRG1Q14331 258 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF542PQ5EBM4 170 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 AARS2Q5JTZ9 985 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 LYPLAL1Q5VWZ2 237 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 KCTD16Q68DU8 428 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 TCEAL6Q6IPX3 200 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 CERS6Q6ZMG9 384 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 RD3Q7Z3Z2 195 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 DENND6AQ8IWF6 608 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 CALML6Q8TD86 181 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 HEXDCQ8WVB3 486 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.45■□□□□ 0.064e-7■■■■■ 58.1
PCDHGC3-204ENST00000617222 OR1E3Q8WZA6 343 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 TCEAL3Q969E4 200 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 CCDC97Q96F63 343 aaPredicted RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 DCUN1D1Q96GG9 259 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 TTC25Q96NG3 672 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 NUSAP1Q9BXS6 441 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 CDC42EP4Q9H3Q1 356 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 CAAP1Q9H8G2 361 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 MRPL40Q9NQ50 206 aaKnown RBP15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 SLC17A4Q9Y2C5 497 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 PLXNA2O75051 1894 aa15.45■□□□□ 0.06
PCDHGC3-204ENST00000617222 TNFRSF10CO14798 259 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 SCAMP1O15126 338 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 VEGFDO43915 354 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 OR1I1O60431 355 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 FUCA1P04066 466 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 SYPP08247 313 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 F7P08709 466 aaPredicted RBP15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF806P0C7X5 589 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 TTPAP49638 278 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 PMS2P54278 862 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 B4GALNT1Q00973 533 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 PPARDQ03181 441 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 MGAT5Q09328 741 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 CTBP1Q13363 440 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 GTF2H3Q13889 308 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 ITIH4Q14624 930 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 ALG11Q2TAA5 492 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 UBAP2Q5T6F2 1119 aaKnown RBP15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 TEDDM1Q5T9Z0 273 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNF470Q6ECI4 717 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 DET1Q7L5Y6 550 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 PARGQ86W56 976 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 CILP2Q8IUL8 1156 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 HID1Q8IV36 788 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 RASGEF1AQ8N9B8 481 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 FBF1Q8TES7 1133 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 NAT14Q8WUY8 206 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 FAM167BQ9BTA0 163 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 BOCQ9BWV1 1114 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 TXLNGYQ9BZA5 131 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 CYP4F12Q9HCS2 524 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 DNAJC28Q9NX36 388 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 ZNHIT2Q9UHR6 403 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 KLF15Q9UIH9 416 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 FBXO5Q9UKT4 447 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 RAB21Q9UL25 225 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 PNMA8BQ9ULN7 279 aaPredicted RBP15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 SUFUQ9UMX1 484 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 KNL1Q8NG31 2342 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 SCN8AQ9UQD0 1980 aa15.44■□□□□ 0.06
PCDHGC3-204ENST00000617222 IGLV3-16A0A075B6K0 115 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 TCRBV9S1A1TA0A576 114 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 PRSS38A1L453 326 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 CFAP99D6REC4 459 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 ARHGAP33O14559 1287 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 NUAK1O60285 661 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 DNAJC6O75061 913 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 NDUFS3O75489 264 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 SPAG6O75602 509 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 PIAS1O75925 651 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 ACSL3O95573 720 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 S1PR4O95977 384 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 TNFP01375 233 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 TUBBP07437 444 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 RALBP11234 206 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 OGNP20774 298 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 GNPDA1P46926 289 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 CTSCP53634 463 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 SF3A2Q15428 464 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 HLA-BQ31612 363 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 TMEM220Q6QAJ8 160 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 CYS1Q717R9 158 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 LMNTD2Q8IXW0 634 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 DCLK2Q8N568 766 aa15.43■□□□□ 0.06
PCDHGC3-204ENST00000617222 GABPB2Q8TAK5 448 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 479.6 ms