RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 IMP4Q96G21 291 aaKnown RBP12.99□□□□□ -0.33
RPS28-204ENST00000602140 SLC45A3Q96JT2 553 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 AGAP3Q96P47 875 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 PLEKHG4BQ96PX9 1271 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 ZPBPQ9BS86 351 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 ZSCAN5AQ9BUG6 496 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 BRD8Q9H0E9 1235 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 DEF6Q9H4E7 631 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 EPB41L1Q9H4G0 881 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 GPN2Q9H9Y4 310 aaPredicted RBP12.99□□□□□ -0.33
RPS28-204ENST00000602140 MAGEE1Q9HCI5 957 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.99□□□□□ -0.33
RPS28-204ENST00000602140 BSNQ9UPA5 3926 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 LILRA5A6NI73 299 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 C3orf70A6NLC5 250 aaPredicted RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 ZNF487B1APH4 448 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 GPR89AB7ZAQ6 455 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 APOL1O14791 398 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 POLR1CO15160 346 aaPredicted RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 CAPN5O15484 640 aaPredicted RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 NKX2-8O15522 239 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 ARHGAP6O43182 974 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 STK17BO94768 372 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 TMEM253P0C7T8 217 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 GPR89BP0CG08 455 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 PRKAR1AP10644 381 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 CCR10P46092 362 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 POLE2P56282 527 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 DCDC1P59894 354 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 UBE2IP63279 158 aaKnown RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 CDK18Q07002 472 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 KCNAB2Q13303 367 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 PDK1Q15118 436 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 INSCQ1MX18 579 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 ASTE1Q2TB18 679 aaPredicted RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 PLA2G4EQ3MJ16 856 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 NPNTQ6UXI9 565 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 B4GALNT4Q76KP1 1039 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 PTRH1Q86Y79 214 aaKnown RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 PLXDC1Q8IUK5 500 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 TRAM1L1Q8N609 369 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 AVL9Q8NBF6 648 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 SLC35G2Q8TBE7 412 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 GLYATL1Q969I3 302 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 COL26A1Q96A83 441 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 CATSPER2Q96P56 530 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 GPR63Q9BZJ6 419 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 XPO4Q9C0E2 1151 aaKnown RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 RAD18Q9NS91 495 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 SCHIP1Q9P0W5 487 aaPredicted RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 SLC23A2Q9UGH3 650 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 DNAJC16Q9Y2G8 782 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 ZNF711Q9Y462 761 aa12.98□□□□□ -0.33
RPS28-204ENST00000602140 TMEM184BQ9Y519 407 aaPredicted RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 UBR5O95071 2799 aaPredicted RBP12.98□□□□□ -0.33
RPS28-204ENST00000602140 MN1Q10571 1320 aaPredicted RBP12.97□□□□□ -0.33
RPS28-204ENST00000602140 CHUKO15111 745 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 KMOO15229 486 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 AKR1B10O60218 316 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 MTX2O75431 263 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 MTA2O94776 668 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 VIPP01282 170 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 ZNF7P17097 686 aaPredicted RBP12.97□□□□□ -0.33
RPS28-204ENST00000602140 TYRP1P17643 537 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 XRCC1P18887 633 aaPredicted RBP12.97□□□□□ -0.33
RPS28-204ENST00000602140 SLC19A1P41440 591 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 GFERP55789 205 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 ABHD18Q0P651 414 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 SEPT7Q16181 437 aaKnown RBP12.97□□□□□ -0.33
RPS28-204ENST00000602140 PDPK2PQ6A1A2 396 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 TMEM26Q6ZUK4 368 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 VSIG1Q86XK7 387 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 TRIM48Q8IWZ4 208 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 OR8K1Q8NGG5 319 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 SPATA22Q8NHS9 363 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 TADA1Q96BN2 335 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 C9orf72Q96LT7 481 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 OLFM3Q96PB7 478 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 EFHD1Q9BUP0 239 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 SLC25A51Q9H1U9 297 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 UCK1Q9HA47 277 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 OGFRQ9NZT2 677 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 ZNF624Q9P2J8 865 aaPredicted RBP12.97□□□□□ -0.33
RPS28-204ENST00000602140 NFKBIL1Q9UBC1 381 aaPredicted RBP12.97□□□□□ -0.33
RPS28-204ENST00000602140 TUBD1Q9UJT1 453 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 SLC30A1Q9Y6M5 507 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 SPTA1P02549 2419 aa12.97□□□□□ -0.33
RPS28-204ENST00000602140 SSU72P8A0A1W2PR75 194 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 PDZK1P1A8MUH7 402 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 AURKAO14965 403 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 PPP1R12AO14974 1030 aaPredicted RBP12.96□□□□□ -0.33
RPS28-204ENST00000602140 UBXN7O94888 489 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 DLGAP3O95886 979 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 MT-CYBP00156 380 aaPredicted RBP12.96□□□□□ -0.33
RPS28-204ENST00000602140 C9P02748 559 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 KRT1P04264 644 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 TPM3P06753 285 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 ANKRD34CP0C6C1 535 aa12.96□□□□□ -0.33
RPS28-204ENST00000602140 ZFXP17010 805 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms