RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TUBD1Q9UJT1 453 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 TMPRSS11EQ9UL52 423 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 MN1Q10571 1320 aaPredicted RBP17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 ZNF891A8MT65 544 aaPredicted RBP17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 ARHGAP6O43182 974 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 PIRTP0C851 137 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 SLC2A4P14672 509 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 KCNAB2Q13303 367 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 KDELC2Q7Z4H8 507 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 VSIG1Q86XK7 387 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 ZNF547Q8IVP9 402 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 UNC5BQ8IZJ1 945 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 TRAM1L1Q8N609 369 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 CTNNBL1Q8WYA6 563 aaPredicted RBP17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 SPATA16Q9BXB7 569 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 CEP41Q9BYV8 373 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 STN1Q9H668 368 aaKnown RBP17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 ZNF624Q9P2J8 865 aaPredicted RBP17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 KLHL3Q9UH77 587 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 SHOC2Q9UQ13 582 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 SLC30A1Q9Y6M5 507 aa17.75■□□□□ 0.43
CHMP2A-208ENST00000601220 LRRD1A4D1F6 860 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 GPR89AB7ZAQ6 455 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 STK17BO94768 372 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 SLC25A14O95258 325 aaPredicted RBP17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 TMEM253P0C7T8 217 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 GPR89BP0CG08 455 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 SLC19A1P41440 591 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 MAPK9P45984 424 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 GFERP55789 205 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 TPM4P67936 248 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 ABHD18Q0P651 414 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 MESDQ14696 234 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 SLC14A2Q15849 920 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 KHDC1Q4VXA5 237 aaKnown RBP17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 ZNF569Q5MCW4 686 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 ALS2CLQ60I27 953 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 PDPK2PQ6A1A2 396 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 NPNTQ6UXI9 565 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 NT5DC3Q86UY8 548 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 PHYKPLQ8IUZ5 450 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 GLYATL1Q969I3 302 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 CATSPER2Q96P56 530 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 DNAJC7Q99615 494 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 ZSCAN5AQ9BUG6 496 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 ZMYND15Q9H091 742 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 SLC25A51Q9H1U9 297 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 GPN2Q9H9Y4 310 aaPredicted RBP17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 HEY1Q9Y5J3 304 aa17.74■□□□□ 0.43
CHMP2A-208ENST00000601220 AURKAO14965 403 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 BRAFP15056 766 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 BPIP17213 487 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 CCR10P46092 362 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 PPM1FP49593 454 aaPredicted RBP17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 CDK18Q07002 472 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 AP1B1Q10567 949 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 TMEM26Q6ZUK4 368 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 PTRH1Q86Y79 214 aaKnown RBP17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 PLXDC1Q8IUK5 500 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 AVL9Q8NBF6 648 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 SPATA22Q8NHS9 363 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 SLC35G2Q8TBE7 412 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 C9orf72Q96LT7 481 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 ZNF830Q96NB3 372 aaPredicted RBP17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 AGAP3Q96P47 875 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 ZNF711Q9Y462 761 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 SPO11Q9Y5K1 396 aa17.73■□□□□ 0.43
CHMP2A-208ENST00000601220 ZFC3H1O60293 1989 aaKnown RBP17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 SSU72P8A0A1W2PR75 194 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 POLR1CO15160 346 aaPredicted RBP17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 MTX2O75431 263 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 MTA2O94776 668 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 MT-CYBP00156 380 aaPredicted RBP17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 ZNF7P17097 686 aaPredicted RBP17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 F8A1P23610 371 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 OAS2P29728 719 aaKnown RBP17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 TLE1Q04724 770 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 MAP7Q14244 749 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 PDK1Q15118 436 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 CRTC3Q6UUV7 619 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 ABRAXAS1Q6UWZ7 409 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 B4GALNT4Q76KP1 1039 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 C11orf96Q7Z7L8 435 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 TIMM29Q9BSF4 260 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 XPO4Q9C0E2 1151 aaKnown RBP17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 TRIT1Q9H3H1 467 aaKnown RBP17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 RAD18Q9NS91 495 aa17.72■□□□□ 0.43
CHMP2A-208ENST00000601220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.72■□□□□ 0.435e-9■■■□□ 14.7
CHMP2A-208ENST00000601220 APOL1O14791 398 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 KMOO15229 486 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 TOX3O15405 576 aaPredicted RBP17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 UBXN7O94888 489 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 ZNF28P17035 718 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 TYRP1P17643 537 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 STAT5AP42229 794 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 ARHGAP25P42331 645 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 LEPRP48357 1165 aaKnown RBP17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 CDC20Q12834 499 aa17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 CRTC2Q53ET0 693 aaPredicted RBP17.71■□□□□ 0.43
CHMP2A-208ENST00000601220 TEX44Q53QW1 395 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms