RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 GSDMBQ8TAX9 411 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 SCAMP4Q969E2 229 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 CAVIN3Q969G5 261 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 HDAC10Q969S8 669 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 ZNF669Q96BR6 464 aaPredicted RBP11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 TBATAQ96M53 351 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 EBF2Q9HAK2 575 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 IL21RQ9HBE5 538 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 LRRC4CQ9HCJ2 640 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 BPIFA1Q9NP55 256 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 TOR4AQ9NXH8 423 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 SLC2A6Q9UGQ3 507 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 FKBPLQ9UIM3 349 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 PTPRQQ9UMZ3 2332 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 COQ6Q9Y2Z9 468 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 SLCO1B1Q9Y6L6 691 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 MGAQ8IWI9 3026 aa11.56□□□□□ -0.56
CHMP2A-207ENST00000600804 CCDC162PA2VCL2 907 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 CCDC151A5D8V7 595 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 FSBPO95073 299 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 PRAMEF1O95521 474 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 FAM153BP0C7A2 387 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 ITGALP20701 1170 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 FOXN2P32314 431 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 PFN3P60673 137 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 RACK1P63244 317 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 CACNG1Q06432 222 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 ILF2Q12905 390 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 NFATC2Q13469 925 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 PTPRCAPQ14761 206 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 NAA30Q147X3 362 aaPredicted RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 IRF4Q15306 451 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 FAM153CQ494X1 144 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 MAP9Q49MG5 647 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 AARS2Q5JTZ9 985 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 LYPLAL1Q5VWZ2 237 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 KYAT3Q6YP21 454 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 CERS6Q6ZMG9 384 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 SNX20Q7Z614 316 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 ABI3BPQ7Z7G0 1075 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 CCDC25Q86WR0 208 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 ANKMY2Q8IV38 441 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 PALM2Q8IXS6 379 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 MREGQ8N565 214 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 OR4L1Q8NH43 312 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 BAHD1Q8TBE0 780 aaPredicted RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 ZNF398Q8TD17 642 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 CALML6Q8TD86 181 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 HEXDCQ8WVB3 486 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 ULK4Q96C45 1275 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 COX14Q96I36 57 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 TCF12Q99081 682 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 RIOK2Q9BVS4 552 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 TEX101Q9BY14 249 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 CDC42EP4Q9H3Q1 356 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 GPR27Q9NS67 375 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 CNOT6Q9ULM6 557 aaKnown RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 KNTC1P50748 2209 aa11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 ARID1BQ8NFD5 2236 aaPredicted RBP11.55□□□□□ -0.56
CHMP2A-207ENST00000600804 COL5A1P20908 1838 aaPredicted RBP11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 IGLV3-16A0A075B6K0 115 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 FPGTO14772 594 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 RAD51BO15315 384 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 SLC31A1O15431 190 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 BUD23O43709 281 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 VAPBO95292 243 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 GOT2P00505 430 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 SLC4A1P02730 911 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 C1QAP02745 245 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 OGNP20774 298 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 MAT2AP31153 395 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 MC4RP32245 332 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 PHBP35232 272 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 IGFALSP35858 605 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 PPARGP37231 505 aaPredicted RBP11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 GPX6P59796 221 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 NAB1Q13506 487 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 CHRNA6Q15825 494 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 ATP13A5Q4VNC0 1218 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 NEPROQ6NW34 567 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 CES3Q6UWW8 571 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 FAM151BQ6UXP7 276 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 KIAA0408Q6ZU52 694 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 C3orf62Q6ZUJ4 267 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 DCP2Q8IU60 420 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 CNPY4Q8N129 248 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 MFSD2AQ8NA29 543 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 OR6P1Q8NGX9 317 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 BTN2A2Q8WVV5 523 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 HNRNPLLQ8WVV9 542 aaKnown RBP11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 GLYATL1Q969I3 302 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■■■ 27.5
CHMP2A-207ENST00000600804 CERS2Q96G23 380 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 CRELD1Q96HD1 420 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 BMFQ96LC9 184 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 C9orf72Q96LT7 481 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 FAM167BQ9BTA0 163 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 SPATA16Q9BXB7 569 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 ASB8Q9H765 288 aa11.54□□□□□ -0.56
CHMP2A-207ENST00000600804 MBNL1Q9NR56 388 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms