RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 LRRC57Q8N9N7 239 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 ALG3Q92685 438 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 USP7Q93009 1102 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 PLEKHG4BQ96PX9 1271 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 IL26Q9NPH9 171 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 PRDM8Q9NQV8 689 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 KLC4Q9NSK0 619 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.89□□□□□ -0.03
LIG1-215ENST00000597901 HACD3Q9P035 362 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 AKAP7Q9P0M2 348 aaPredicted RBP14.89□□□□□ -0.03
LIG1-215ENST00000597901 IL17CQ9P0M4 197 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 SLC23A2Q9UGH3 650 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 RSPH14Q9UHP6 348 aa14.89□□□□□ -0.03
LIG1-215ENST00000597901 GRID2IPA4D2P6 1211 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 OR5K4A6NMS3 321 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 TK2O00142 265 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 VEGFDO43915 354 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 MTX2O75431 263 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 CDK14O94921 469 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 TJP3O95049 919 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 RBP3P10745 1247 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 CCL4P13236 92 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 F3P13726 295 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 HLA-DPA1P20036 260 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 MPSTP25325 297 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 MAPK10P53779 464 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 EIF3EP60228 445 aaKnown RBP14.88□□□□□ -0.03
LIG1-215ENST00000597901 GPLD1P80108 840 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 HHEXQ03014 270 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 TMEM115Q12893 351 aaPredicted RBP14.88□□□□□ -0.03
LIG1-215ENST00000597901 TRA2AQ13595 282 aaKnown RBP eCLIP14.88□□□□□ -0.03
LIG1-215ENST00000597901 ATP13A5Q4VNC0 1218 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 KHDC1Q4VXA5 237 aaKnown RBP14.88□□□□□ -0.03
LIG1-215ENST00000597901 ANKRD20A2Q5SQ80 823 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 ARHGAP40Q5TG30 622 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 ANKRD20A1Q5TYW2 823 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 ANKRD20A3Q5VUR7 823 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 TMEM71Q6P5X7 295 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 DARS2Q6PI48 645 aaKnown RBP14.88□□□□□ -0.03
LIG1-215ENST00000597901 SLC9B2Q86UD5 537 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 TMEM139Q8IV31 216 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 LSM14AQ8ND56 463 aaKnown RBP14.88□□□□□ -0.03
LIG1-215ENST00000597901 RCBTB1Q8NDN9 531 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 OR4D9Q8NGE8 314 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 DTX3LQ8TDB6 740 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 SH3KBP1Q96B97 665 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 CCDC74BQ96LY2 380 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 VPS35Q96QK1 796 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 DPYSL5Q9BPU6 564 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 FERMT1Q9BQL6 677 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 SARS2Q9NP81 518 aaKnown RBP14.88□□□□□ -0.03
LIG1-215ENST00000597901 IMPACTQ9P2X3 320 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 ACSL6Q9UKU0 697 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 AMFRQ9UKV5 643 aa14.88□□□□□ -0.03
LIG1-215ENST00000597901 ITPR1Q14643 2758 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 KIR2DS5A0A0G2JLQ3 304 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 A0A0G2JNG1 304 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 KIR2DS3K7RE56 304 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 HGSO14964 777 aaPredicted RBP14.87□□□□□ -0.03
LIG1-215ENST00000597901 KMOO15229 486 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 BUD23O43709 281 aaKnown RBP14.87□□□□□ -0.03
LIG1-215ENST00000597901 UGT1A9O60656 530 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 ANXA9O76027 345 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 SLC2A4P14672 509 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 ZNF7P17097 686 aaPredicted RBP14.87□□□□□ -0.03
LIG1-215ENST00000597901 UGT1A6P19224 532 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 UGT1A1P22309 533 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 UGT1A4P22310 534 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 UGT1A3P35503 534 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 GEMP55040 296 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 VAC14Q08AM6 782 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 C19orf57Q0VDD7 668 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 KIF5AQ12840 1032 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 NFATC2Q13469 925 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 KIR2DS5Q14953 304 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 CHRNA6Q15825 494 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 ZDHHC20Q5W0Z9 365 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 ITPRIPL1Q6GPH6 555 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 RANBP10Q6VN20 620 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 LRRTM4Q86VH4 590 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 PHYKPLQ8IUZ5 450 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 CDKL3Q8IVW4 592 aaPredicted RBP14.87□□□□□ -0.03
LIG1-215ENST00000597901 OR10G6Q8NH81 332 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 BLOC1S5Q8TDH9 187 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 SLC39A7Q92504 469 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 AHCYL2Q96HN2 611 aaKnown RBP14.87□□□□□ -0.03
LIG1-215ENST00000597901 FAM118BQ9BPY3 351 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 GORASP1Q9BQQ3 440 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 GBA3Q9H227 469 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 UGT1A7Q9HAW7 530 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 UGT1A10Q9HAW8 530 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 UGT1A8Q9HAW9 530 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.87□□□□□ -0.03
LIG1-215ENST00000597901 TMEM9Q9P0T7 183 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 PDP2Q9P2J9 529 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 CPNE7Q9UBL6 633 aa14.87□□□□□ -0.03
LIG1-215ENST00000597901 PRAMEF33A0A0G2JMD5 474 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 A0A0U1RQJ8 604 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 MACROD2A1Z1Q3 448 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 C9orf172C9J069 976 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms