RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PRKAB1Q9Y478 270 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 PTPRQQ9UMZ3 2332 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 ZNF106Q9H2Y7 1883 aaKnown RBP12.89□□□□□ -0.35
USE1-207ENST00000596136 RHPN2P1A8MT19 583 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 ZW10O43264 779 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 SLC4A1P02730 911 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 CCDC175P0C221 793 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 LPOP22079 712 aaPredicted RBP12.89□□□□□ -0.35
USE1-207ENST00000596136 SPAM1P38567 509 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 INHBCP55103 352 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 EIF3IQ13347 325 aaKnown RBP12.89□□□□□ -0.35
USE1-207ENST00000596136 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
USE1-207ENST00000596136 KHDC1Q4VXA5 237 aaKnown RBP12.89□□□□□ -0.35
USE1-207ENST00000596136 ZNF648Q5T619 568 aaPredicted RBP12.89□□□□□ -0.35
USE1-207ENST00000596136 TMPRSS9Q7Z410 1059 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 ZNF547Q8IVP9 402 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 Q8N9G6 341 aaPredicted RBP12.89□□□□□ -0.35
USE1-207ENST00000596136 FAM71DQ8N9W8 422 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 TIMM29Q9BSF4 260 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 ARFGAP3Q9NP61 516 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 SARS2Q9NP81 518 aaKnown RBP12.89□□□□□ -0.35
USE1-207ENST00000596136 SMOXQ9NWM0 555 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 PKP3Q9Y446 797 aa12.89□□□□□ -0.35
USE1-207ENST00000596136 AHCTF1Q8WYP5 2266 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 GLYATL1P3A0A0U1RQE8 302 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 OR5K4A6NMS3 321 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 AGAP14A8MT82 685 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 CDRT15L2A8MXV6 281 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 KMOO15229 486 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 CDK14O94921 469 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 METTL18O95568 372 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 CPNE6O95741 557 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 ACP5P13686 325 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 F3P13726 295 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 CD1CP29017 333 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
USE1-207ENST00000596136 GDF10P55107 478 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 OR1D5P58170 312 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 TMEM115Q12893 351 aaPredicted RBP12.88□□□□□ -0.35
USE1-207ENST00000596136 OLIG2Q13516 323 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 ITGA9Q13797 1035 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
USE1-207ENST00000596136 CHRNA6Q15825 494 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 C3orf38Q5JPI3 329 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 ZNF574Q6ZN55 896 aaPredicted RBP12.88□□□□□ -0.35
USE1-207ENST00000596136 C11orf96Q7Z7L8 435 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 CLEC14AQ86T13 490 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 LRRTM4Q86VH4 590 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 SLC13A5Q86YT5 568 aaPredicted RBP12.88□□□□□ -0.35
USE1-207ENST00000596136 DDHD1Q8NEL9 900 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 SLC37A2Q8TED4 501 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 TMEM159Q96B96 161 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 TBL1YQ9BQ87 522 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 FOXP3Q9BZS1 431 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 STRADBQ9C0K7 418 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 SLC23A2Q9UGH3 650 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 ATXN7L1Q9ULK2 861 aaPredicted RBP12.88□□□□□ -0.35
USE1-207ENST00000596136 KCNK6Q9Y257 313 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 SSUH2Q9Y2M2 353 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 ARL5AQ9Y689 179 aa12.88□□□□□ -0.35
USE1-207ENST00000596136 IGHV1OR21-1A0A087WYE8 117 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 KIR2DS5A0A0G2JLQ3 304 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 A0A0G2JNG1 304 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 PMS2P1A4D2B8 440 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 C2orf81A6NN90 581 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 KIR2DS3K7RE56 304 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 PLD2O14939 933 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 STX7O15400 261 aaKnown RBP12.87□□□□□ -0.35
USE1-207ENST00000596136 BUD23O43709 281 aaKnown RBP12.87□□□□□ -0.35
USE1-207ENST00000596136 LIASO43766 372 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A9O60656 530 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 KCNJ13O60928 360 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 MTX2O75431 263 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 PTMAP06454 111 aaKnown RBP12.87□□□□□ -0.35
USE1-207ENST00000596136 SLC2A4P14672 509 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 ZNF7P17097 686 aaPredicted RBP12.87□□□□□ -0.35
USE1-207ENST00000596136 XRCC1P18887 633 aaPredicted RBP12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A6P19224 532 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A1P22309 533 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A4P22310 534 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 ALDH4A1P30038 563 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 CA5AP35218 305 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A3P35503 534 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 UGT1A5P35504 534 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 GPLD1P80108 840 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 XIAPP98170 497 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 PDE1BQ01064 536 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 CFHR1Q03591 330 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 KIR2DS5Q14953 304 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 RPS6KA1Q15418 735 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 LDLRAP1Q5SW96 308 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 SEL1L2Q5TEA6 688 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 WASH2PQ6VEQ5 465 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 ARHGEF18Q6ZSZ5 1173 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 RAB11FIP2Q7L804 512 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 PIM3Q86V86 326 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 OR4K2Q8NGD2 314 aa12.87□□□□□ -0.35
USE1-207ENST00000596136 ZNF398Q8TD17 642 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms