RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 HDDC3Q8N4P3 179 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 CCDC63Q8NA47 563 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 LRRC8CQ8TDW0 803 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 CXorf40AQ8TE69 158 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 HEXDCQ8WVB3 486 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 ZNF75CPQ92670 426 aaPredicted RBP20.6■□□□□ 0.89
PNKP-203ENST00000593946 FAM136AQ96C01 138 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 AP2M1Q96CW1 435 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 COPS8Q99627 209 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 GPR21Q99679 349 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 SIRPGQ9P1W8 387 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 COPG2Q9UBF2 871 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 A0A1W2PP55 124 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 FADS2P1A8MWK0 482 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 MMP20O60882 483 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 RECQL5O94762 991 aaPredicted RBP20.59■□□□□ 0.89
PNKP-203ENST00000593946 PYGLP06737 847 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 NSG1P42857 185 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 KPNA2P52292 529 aaKnown RBP20.59■□□□□ 0.89
PNKP-203ENST00000593946 B4GALNT1Q00973 533 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 CCDC15Q0P6D6 951 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 PCLAFQ15004 111 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 GPRC6AQ5T6X5 926 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 AGAP9Q5VTM2 703 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.59■□□□□ 0.89
PNKP-203ENST00000593946 LRRC34Q8IZ02 419 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 FSTL5Q8N475 847 aaPredicted RBP20.59■□□□□ 0.89
PNKP-203ENST00000593946 SPATA6LQ8N4H0 392 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 VPS35Q96QK1 796 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 GALPQ9UBC7 116 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 PRSS21Q9Y6M0 314 aa20.59■□□□□ 0.89
PNKP-203ENST00000593946 H3BMM5 538 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 TSPAN6O43657 245 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 GLRBP48167 497 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 ZP2Q05996 745 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 EOGTQ5NDL2 527 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 PAQR3Q6TCH7 311 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 MACC1Q6ZN28 852 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 CLDN19Q8N6F1 224 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 CD200R1Q8TD46 325 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 NUS1Q96E22 293 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 SLC6A17Q9H1V8 727 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 RABEP2Q9H5N1 569 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 MANSC1Q9H8J5 431 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 MMP17Q9ULZ9 603 aa20.58■□□□□ 0.89
PNKP-203ENST00000593946 NDRG2Q9UN36 371 aaKnown RBP20.58■□□□□ 0.89
PNKP-203ENST00000593946 TARM1B6A8C7 271 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 E5RI56 91 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 TK2O00142 265 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 RNASEH2AO75792 299 aaKnown RBP20.58■□□□□ 0.88
PNKP-203ENST00000593946 FAM107AO95990 144 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 DNTTP04053 509 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 VIMP08670 466 aaKnown RBP20.58■□□□□ 0.88
PNKP-203ENST00000593946 SBK3P0C264 359 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 DRD4P21917 467 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 SKIV2L2P42285 1042 aaKnown RBP20.58■□□□□ 0.88
PNKP-203ENST00000593946 CLCN7P51798 805 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 PTRHD1Q6GMV3 140 aaKnown RBP20.58■□□□□ 0.88
PNKP-203ENST00000593946 ZNF852Q6ZMS4 543 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 NUDCD3Q8IVD9 361 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 DDHD1Q8NEL9 900 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 GIMAP7Q8NHV1 300 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 MAFAQ8NHW3 353 aaPredicted RBP20.58■□□□□ 0.88
PNKP-203ENST00000593946 RDH11Q8TC12 318 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 BCAS4Q8TDM0 211 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 BTN2A2Q8WVV5 523 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 CCT8L2Q96SF2 557 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 SLC30A3Q99726 388 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 SYTL2Q9HCH5 934 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 FBXL12Q9NXK8 326 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 XPR1Q9UBH6 696 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 SCML1Q9UN30 329 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 SORCS3Q9UPU3 1222 aa20.58■□□□□ 0.88
PNKP-203ENST00000593946 IQCF5A8MTL0 148 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 G3V2L1 256 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 KLF11O14901 512 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 LZTS3O60299 673 aaPredicted RBP20.57■□□□□ 0.88
PNKP-203ENST00000593946 SOD1P00441 154 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 CPA3P15088 417 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 CHRM3P20309 590 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 BGNP21810 368 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 ALDH3A1P30838 453 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 DPTQ07507 201 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 ACAP2Q15057 778 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 TECRLQ5HYJ1 363 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 UGT3A1Q6NUS8 523 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 KLC3Q6P597 504 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 TMEM92Q6UXU6 159 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 ZNF687Q8N1G0 1237 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 SIDT2Q8NBJ9 832 aaKnown RBP20.57■□□□□ 0.88
PNKP-203ENST00000593946 RAB3IL1Q8TBN0 382 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 SCYL1Q96KG9 808 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 MRPL57Q9BQC6 102 aaKnown RBP20.57■□□□□ 0.88
PNKP-203ENST00000593946 UNKQ9C0B0 810 aaKnown RBP20.57■□□□□ 0.88
PNKP-203ENST00000593946 MRPL46Q9H2W6 279 aaKnown RBP20.57■□□□□ 0.88
PNKP-203ENST00000593946 CPSF2Q9P2I0 782 aaKnown RBP20.57■□□□□ 0.88
PNKP-203ENST00000593946 TRMT6Q9UJA5 497 aaKnown RBP20.57■□□□□ 0.88
PNKP-203ENST00000593946 MID2Q9UJV3 735 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 DHRS7Q9Y394 339 aa20.57■□□□□ 0.88
PNKP-203ENST00000593946 ANKRD12Q6UB98 2062 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms