RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SCARF2Q96GP6 870 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-220ENST00000588917 ZNF514Q96K75 400 aaPredicted RBP19.38■□□□□ 0.69
CIRBP-220ENST00000588917 COPS8Q99627 209 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 RHOXF2Q9BQY4 288 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 TMEM9BQ9NQ34 198 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 ZC3H7BQ9UGR2 993 aaKnown RBP19.38■□□□□ 0.69
CIRBP-220ENST00000588917 MOSPD1Q9UJG1 213 aa19.38■□□□□ 0.69
CIRBP-220ENST00000588917 CACNA1BQ00975 2339 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 TRBV5-4A0A0C4DH59 114 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 F8W8V4 182 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 CCL22O00626 93 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 CD3EAPO15446 510 aaKnown RBP19.37■□□□□ 0.69
CIRBP-220ENST00000588917 GOT2P00505 430 aaKnown RBP19.37■□□□□ 0.69
CIRBP-220ENST00000588917 CTSEP14091 401 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 JUNDP17535 347 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 MSH3P20585 1137 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 CCT8P50990 548 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 LIMK1P53667 647 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 EIF2B5Q13144 721 aaKnown RBP19.37■□□□□ 0.69
CIRBP-220ENST00000588917 SLC14A1Q13336 389 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 HLTFQ14527 1009 aaKnown RBP eCLIP19.37■□□□□ 0.69
CIRBP-220ENST00000588917 TRADDQ15628 312 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 LONRF1Q17RB8 773 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 TPRG1LQ5T0D9 272 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 TEX35Q5T0J7 233 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 GPRC6AQ5T6X5 926 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 CES3Q6UWW8 571 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 KDM7AQ6ZMT4 941 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 HID1Q8IV36 788 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 PALM2Q8IXS6 379 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 EIF1ADQ8N9N8 165 aaKnown RBP19.37■□□□□ 0.69
CIRBP-220ENST00000588917 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.37■□□□□ 0.69
CIRBP-220ENST00000588917 CALML6Q8TD86 181 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 SCG3Q8WXD2 468 aaKnown RBP19.37■□□□□ 0.69
CIRBP-220ENST00000588917 PWWP2AQ96N64 755 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 TCF12Q99081 682 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 EDEM2Q9BV94 578 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 CATSPERZQ9NTU4 200 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 ZDHHC18Q9NUE0 388 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 DNAAF2Q9NVR5 837 aaKnown RBP19.37■□□□□ 0.69
CIRBP-220ENST00000588917 ZDHHC3Q9NYG2 299 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 SPASTQ9UBP0 616 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 TMEM98Q9Y2Y6 226 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 PCDHGB2Q9Y5G2 931 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 SDK1Q7Z5N4 2213 aa19.37■□□□□ 0.69
CIRBP-220ENST00000588917 PRSS38A1L453 326 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 NEMP2A6NFY4 417 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 NUAK1O60285 661 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 ACRV1P26436 265 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 AKT1P31749 480 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 FOXN2P32314 431 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 TTPAP49638 278 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 THOC5Q13769 683 aaKnown RBP19.36■□□□□ 0.69
CIRBP-220ENST00000588917 ITIH4Q14624 930 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 ALG11Q2TAA5 492 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 DOK6Q6PKX4 331 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 RD3Q7Z3Z2 195 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 ADGRG6Q86SQ4 1221 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 SERPINA9Q86WD7 417 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 ZBED8Q8IZ13 594 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 PHACTR4Q8IZ21 702 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 AGGF1Q8N302 714 aaeCLIP19.36■□□□□ 0.69
CIRBP-220ENST00000588917 FSTL5Q8N475 847 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-220ENST00000588917 GPR150Q8NGU9 434 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 TSACCQ96A04 125 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-220ENST00000588917 FCRL3Q96P31 734 aaPredicted RBP19.36■□□□□ 0.69
CIRBP-220ENST00000588917 FAM96AQ9H5X1 160 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 CARS2Q9HA77 564 aaKnown RBP19.36■□□□□ 0.69
CIRBP-220ENST00000588917 CYP4F12Q9HCS2 524 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 SAYSD1Q9NPB0 183 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 FSCN3Q9NQT6 498 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 TM7SF3Q9NS93 570 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 TRNAU1APQ9NX07 287 aaKnown RBP19.36■□□□□ 0.69
CIRBP-220ENST00000588917 ATXN10Q9UBB4 475 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 TMPRSS11EQ9UL52 423 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 GPR34Q9UPC5 381 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 OAS3Q9Y6K5 1087 aaKnown RBP19.36■□□□□ 0.69
CIRBP-220ENST00000588917 DOCK9Q9BZ29 2069 aa19.36■□□□□ 0.69
CIRBP-220ENST00000588917 ZCWPW2A0A1B0GU75 182 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 GSTA2P09210 222 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 PMLP29590 882 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 ARCN1P48444 511 aaKnown RBP19.35■□□□□ 0.69
CIRBP-220ENST00000588917 POLD2P49005 469 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 FRG1Q14331 258 aaKnown RBP19.35■□□□□ 0.69
CIRBP-220ENST00000588917 CRYMQ14894 314 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 ELOCQ15369 112 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 PRAMEF14Q5SWL7 426 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 NEPROQ6NW34 567 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 TRIM74Q86UV6 250 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 GALNT13Q8IUC8 556 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 FBXO36Q8NEA4 188 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 OR1E3Q8WZA6 343 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 UBXN4Q92575 508 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 OR2AG1Q9H205 316 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 FGF22Q9HCT0 170 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 C20orf96Q9NUD7 363 aaPredicted RBP19.35■□□□□ 0.69
CIRBP-220ENST00000588917 APOBEC3BQ9UH17 382 aaKnown RBP19.35■□□□□ 0.69
CIRBP-220ENST00000588917 ZNHIT2Q9UHR6 403 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 SUFUQ9UMX1 484 aa19.35■□□□□ 0.69
CIRBP-220ENST00000588917 CHMP2BQ9UQN3 213 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms