RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 SLC44A1Q8WWI5 657 aa4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 ZUFSPQ96AP4 578 aa4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 INTS12Q96CB8 462 aaKnown RBP4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 PIP5K1AQ99755 562 aa4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 FSD1Q9BTV5 496 aa4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 TMEM39BQ9GZU3 492 aa4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 PCDHB16Q9NRJ7 776 aa4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 CRYL1Q9Y2S2 319 aa4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 JRKLQ9Y4A0 524 aa4.15□□□□□ -1.75
CACNA1A-208ENST00000587451 IGKV3D-15A0A087WSY6 115 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 A0A1W2PPH5 198 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 H0YIN7 160 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 NDUFS3O75489 264 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 DAB1O75553 588 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 SPARCP09486 303 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 MCCP23508 829 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 CHRNB4P30926 498 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 DCTP40126 519 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 MRPS34P82930 218 aaKnown RBP4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 ADIPOQQ15848 244 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 TMEM95Q3KNT9 176 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 CDONQ4KMG0 1287 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 PACS1Q6VY07 963 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 LONP2Q86WA8 852 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 ADAD2Q8NCV1 583 aaKnown RBP4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 ETNPPLQ8TBG4 499 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 PPP1R13BQ96KQ4 1090 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 TBATAQ96M53 351 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 LITAFQ99732 161 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 BICC1Q9H694 974 aaKnown RBP4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 PREBQ9HCU5 417 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 RANGRFQ9HD47 186 aaPredicted RBP4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 FBXW11Q9UKB1 542 aa4.14□□□□□ -1.75
CACNA1A-208ENST00000587451 A0A1W2PPI3 338 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 C1orf226A1L170 272 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 A6NLC8 198 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 BAG4O95429 457 aaKnown RBP4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 ELF1P32519 619 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 BSGP35613 385 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 DRG2P55039 364 aaKnown RBP4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 TMEM115Q12893 351 aaPredicted RBP4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 CDC16Q13042 620 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 KIR2DS3Q14952 304 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 ZNF805Q5CZA5 627 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 ZNF772Q68DY9 489 aaPredicted RBP4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 ARHGAP17Q68EM7 881 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 PM20D2Q8IYS1 436 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 HACE1Q8IYU2 909 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 EMC1Q8N766 993 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 ZNF485Q8NCK3 441 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 HCAR2Q8TDS4 363 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 RRP36Q96EU6 259 aaKnown RBP4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 SEMA3CQ99985 751 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 AGXT2Q9BYV1 514 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 ZBTB20Q9HC78 741 aaPredicted RBP4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 UBN1Q9NPG3 1134 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 COPG2Q9UBF2 871 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 KCNK7Q9Y2U2 307 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 C2CD2Q9Y426 696 aa4.13□□□□□ -1.75
CACNA1A-208ENST00000587451 NPIPB15A6NHN6 443 aaPredicted RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 HHLA1C9JL84 531 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 TMEM178BH3BS89 294 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 CIDEAO60543 219 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 CCNDBP1O95273 360 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 NR3C1P04150 777 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 PATE4P0C8F1 98 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 ZNF883P0CG24 379 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 HOXA13P31271 388 aaPredicted RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 TUBP50607 506 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 CTSCP53634 463 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 NAB2Q15742 525 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 TECRLQ5HYJ1 363 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 SEPT14Q6ZU15 432 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 PIWIL4Q7Z3Z4 852 aaKnown RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 R3HCC1LQ7Z5L2 792 aaKnown RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 TRPT1Q86TN4 253 aaKnown RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 RNF168Q8IYW5 571 aaPredicted RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 TMEM116Q8NCL8 245 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 HM13Q8TCT9 377 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 OXNAD1Q96HP4 312 aaPredicted RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 SEPT5Q99719 369 aaPredicted RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 ASCL2Q99929 193 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 SLC52A3Q9NQ40 469 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 LIMA1Q9UHB6 759 aaKnown RBP4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 GTF2A1LQ9UNN4 478 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 CLIC4Q9Y696 253 aa4.12□□□□□ -1.75
CACNA1A-208ENST00000587451 A0A0G2JNG1 304 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 A0A1W2PP11 408 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 PSMD14O00487 310 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 MAP2K7O14733 419 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 ATP2A1O14983 1001 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 NPHP1O15259 732 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 NR1D1P20393 614 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 PIK3CAP42336 1068 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 RUNX1T1Q06455 604 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 KIR2DS5Q14953 304 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 C14orf177Q52M58 125 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 LCN10Q6JVE6 187 aa4.11□□□□□ -1.75
CACNA1A-208ENST00000587451 RBMS3Q6XE24 437 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms