RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SLC9B2Q86UD5 537 aa12.24□□□□□ -0.45
SS18-225ENST00000585121 SFRP1Q8N474 314 aa12.24□□□□□ -0.45
SS18-225ENST00000585121 BRSK1Q8TDC3 778 aa12.24□□□□□ -0.45
SS18-225ENST00000585121 PRR11Q96HE9 360 aaPredicted RBP12.24□□□□□ -0.45
SS18-225ENST00000585121 PDLIM2Q96JY6 352 aa12.24□□□□□ -0.45
SS18-225ENST00000585121 DESI2Q9BSY9 194 aa12.24□□□□□ -0.45
SS18-225ENST00000585121 TSGA10Q9BZW7 698 aa12.24□□□□□ -0.45
SS18-225ENST00000585121 ARFGAP3Q9NP61 516 aa12.24□□□□□ -0.45
SS18-225ENST00000585121 LOXL2Q9Y4K0 774 aa12.24□□□□□ -0.45
SS18-225ENST00000585121 ARHGEF17Q96PE2 2063 aaPredicted RBP12.23□□□□□ -0.45
SS18-225ENST00000585121 KIR2DS5A0A0G2JLQ3 304 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 A0A0G2JNG1 304 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 C2orf81A6NN90 581 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 CDRT15L2A8MXV6 281 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 KIR2DS3K7RE56 304 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 AURKAO14965 403 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 STX7O15400 261 aaKnown RBP12.23□□□□□ -0.45
SS18-225ENST00000585121 KLK10O43240 276 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 CDK14O94921 469 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 VCLP18206 1134 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 SPAM1P38567 509 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 CHRNA4P43681 627 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 FASLGP48023 281 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 HHEXQ03014 270 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 TLE3Q04726 772 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 KIR2DS5Q14953 304 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 INSCQ1MX18 579 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 ANKRD20A2Q5SQ80 823 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 ANKRD20A1Q5TYW2 823 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 ANKRD20A3Q5VUR7 823 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 IYDQ6PHW0 289 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 ADGRG6Q86SQ4 1221 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 CLEC14AQ86T13 490 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 LRRTM4Q86VH4 590 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 TMEM139Q8IV31 216 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 OR10G6Q8NH81 332 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 SLC37A2Q8TED4 501 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 UBE2Q2Q8WVN8 375 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 ALG3Q92685 438 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 VPS35Q96QK1 796 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 FICDQ9BVA6 458 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.23□□□□□ -0.45
SS18-225ENST00000585121 ZCCHC2Q9C0B9 1178 aaKnown RBP12.23□□□□□ -0.45
SS18-225ENST00000585121 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 C10orf88Q9H8K7 445 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 RDH14Q9HBH5 336 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 SARS2Q9NP81 518 aaKnown RBP12.23□□□□□ -0.45
SS18-225ENST00000585121 KLC4Q9NSK0 619 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 TBC1D29Q9UFV1 150 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 PISDQ9UG56 409 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 PCDHGA7Q9Y5G6 932 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 UNC13CQ8NB66 2214 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 CACNA1GO43497 2377 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 ADAMTS20P59510 1910 aa12.23□□□□□ -0.45
SS18-225ENST00000585121 IGHV1OR21-1A0A087WYE8 117 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 EIF4E1BA6NMX2 242 aaKnown RBP12.22□□□□□ -0.45
SS18-225ENST00000585121 HGSO14964 777 aaPredicted RBP12.22□□□□□ -0.45
SS18-225ENST00000585121 DUX1O43812 170 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 FTCDO95954 541 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 AGTP01019 485 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 F3P13726 295 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 CD1CP29017 333 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 CLCNKAP51800 687 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 TMPRSS3P57727 454 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 TRA2AQ13595 282 aaKnown RBP eCLIP12.22□□□□□ -0.45
SS18-225ENST00000585121 ITGA9Q13797 1035 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 ATP13A5Q4VNC0 1218 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 ZNF648Q5T619 568 aaPredicted RBP12.22□□□□□ -0.45
SS18-225ENST00000585121 TMEM164Q5U3C3 297 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 CRTC3Q6UUV7 619 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 SLITRK4Q8IW52 837 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 TTC30BQ8N4P2 665 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 RNF10Q8N5U6 811 aaKnown RBP12.22□□□□□ -0.45
SS18-225ENST00000585121 DTX3LQ8TDB6 740 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 SPATA13Q96N96 652 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 FCRL3Q96P31 734 aaPredicted RBP12.22□□□□□ -0.45
SS18-225ENST00000585121 NUDT22Q9BRQ3 303 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 TIMM29Q9BSF4 260 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 SEMA6CQ9H3T2 930 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 PRORYQ9H606 182 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 WDR70Q9NW82 654 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 IL17CQ9P0M4 197 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 PCYT1BQ9Y5K3 369 aaPredicted RBP12.22□□□□□ -0.45
SS18-225ENST00000585121 NBEAQ8NFP9 2946 aa12.22□□□□□ -0.45
SS18-225ENST00000585121 GLYATL1P3A0A0U1RQE8 302 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 PMS2P1A4D2B8 440 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 AGRPO00253 132 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 CHUKO15111 745 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 KRT86O43790 486 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 MTX2O75431 263 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 HGFP14210 728 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 ZNF7P17097 686 aaPredicted RBP12.21□□□□□ -0.45
SS18-225ENST00000585121 PSMB4P28070 264 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 SLC5A2P31639 672 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 CSTF2P33240 577 aaKnown RBP eCLIP12.21□□□□□ -0.45
SS18-225ENST00000585121 MAPK10P53779 464 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 CXADRP78310 365 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 PDE1BQ01064 536 aa12.21□□□□□ -0.45
SS18-225ENST00000585121 TMEM115Q12893 351 aaPredicted RBP12.21□□□□□ -0.45
SS18-225ENST00000585121 NFATC2Q13469 925 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms