RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FIS1Q9Y3D6 152 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 L3MBTL1Q9Y468 752 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 MTCH2Q9Y6C9 303 aa22.46■■□□□ 1.19
CCDC47-204ENST00000582252 TMEM233B4DJY2 109 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 BTN3A1O00481 513 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 ENTPD5O75356 428 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 PRAMEF12O95522 483 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 MTHFD2P13995 350 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 FSHRP23945 695 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 STK19P49842 368 aaPredicted RBP22.45■■□□□ 1.19
CCDC47-204ENST00000582252 ECT2LQ008S8 904 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 CYLC2Q14093 348 aaPredicted RBP22.45■■□□□ 1.19
CCDC47-204ENST00000582252 GRIN2CQ14957 1233 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 ACCSLQ4AC99 568 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 PTRHD1Q6GMV3 140 aaKnown RBP22.45■■□□□ 1.19
CCDC47-204ENST00000582252 FAM151BQ6UXP7 276 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 TPRG1Q6ZUI0 275 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 SIDT2Q8NBJ9 832 aaKnown RBP22.45■■□□□ 1.19
CCDC47-204ENST00000582252 EID2BQ96D98 161 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 LINGO1Q96FE5 620 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 CATSPER2Q96P56 530 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 LENG8Q96PV6 779 aaPredicted RBP22.45■■□□□ 1.19
CCDC47-204ENST00000582252 SLC2A11Q9BYW1 496 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 PPIL1Q9Y3C6 166 aa22.45■■□□□ 1.19
CCDC47-204ENST00000582252 MYOFQ9NZM1 2061 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 GLYATL1P3A0A0U1RQE8 302 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 LOC100653049A0A140TA62 436 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 KRT34O76011 436 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 CLDN7O95471 211 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 FGF4P08620 206 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 TYRP14679 529 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 GM2AP17900 193 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 WEE1P30291 646 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 CTSOP43234 321 aaPredicted RBP22.45■■□□□ 1.18
CCDC47-204ENST00000582252 SLC25A3Q00325 362 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 TSNQ15631 228 aaKnown RBP22.45■■□□□ 1.18
CCDC47-204ENST00000582252 WLSQ5T9L3 541 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 ZDHHC20Q5W0Z9 365 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 ANKS6Q68DC2 871 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 C16orf89Q6UX73 402 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 SERPINA9Q86WD7 417 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 ECHDC3Q96DC8 303 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 PDLIM5Q96HC4 596 aaKnown RBP22.45■■□□□ 1.18
CCDC47-204ENST00000582252 ZBTB26Q9HCK0 441 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 CRLS1Q9UJA2 301 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 DHRS7Q9Y394 339 aa22.45■■□□□ 1.18
CCDC47-204ENST00000582252 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.45■■□□□ 1.18
CCDC47-204ENST00000582252 ECI2O75521 394 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 JUNP05412 331 aaKnown RBP22.44■■□□□ 1.18
CCDC47-204ENST00000582252 GKP32189 559 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 RECQLP46063 649 aaPredicted RBP22.44■■□□□ 1.18
CCDC47-204ENST00000582252 NFATC2Q13469 925 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 MAPRE2Q15555 327 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 CDKN3Q16667 212 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 PREPLQ4J6C6 727 aaPredicted RBP22.44■■□□□ 1.18
CCDC47-204ENST00000582252 ICE2Q659A1 982 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 CES5AQ6NT32 575 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 PLPP6Q8IY26 295 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 FUBP1Q96AE4 644 aaKnown RBP22.44■■□□□ 1.18
CCDC47-204ENST00000582252 ASIC4Q96FT7 647 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 SCRN2Q96FV2 425 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 ZSWIM3Q96MP5 696 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 APOL5Q9BWW9 433 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 EBF2Q9HAK2 575 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 MARK1Q9P0L2 795 aa22.44■■□□□ 1.18
CCDC47-204ENST00000582252 TRBV5-4A0A0C4DH59 114 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 NPEPPSL1A6NEC2 478 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 SNX2O60749 519 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 GPC4O75487 556 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 CCNHP51946 323 aaPredicted RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 SQLEQ14534 574 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 CBX2Q14781 532 aaPredicted RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 GEN1Q17RS7 908 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 ACSBG2Q5FVE4 666 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 SWT1Q5T5J6 900 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 SPNS2Q8IVW8 549 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 NPAS3Q8IXF0 933 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 AHI1Q8N157 1196 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 C1QTNF3Q9BXJ4 246 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 DENND4AQ7Z401 1863 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 CDC7O00311 574 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 KLK8O60259 260 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 ANP32DO95626 131 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 BPIP17213 487 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 POLR2EP19388 210 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 ITGAXP20702 1163 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 NFKBIAP25963 317 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 ACRV1P26436 265 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 EEF1DP29692 281 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 RGS4P49798 205 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 CLCN7P51798 805 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 POLR2LP62875 67 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 LCP2Q13094 533 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 CCDC6Q16204 474 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 KHDC1Q4VXA5 237 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 CHSY3Q70JA7 882 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 RPS27LQ71UM5 84 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 EFL1Q7Z2Z2 1120 aaKnown RBP22.43■■□□□ 1.18
CCDC47-204ENST00000582252 SNX32Q86XE0 403 aa22.43■■□□□ 1.18
CCDC47-204ENST00000582252 GPSM1Q86YR5 675 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms