RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 FASTKD3Q14CZ7 662 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 ZDHHC20Q5W0Z9 365 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 CYS1Q717R9 158 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 HSD11B1LQ7Z5J1 315 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 ABI3BPQ7Z7G0 1075 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 MARCH9Q86YJ5 346 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 DCP2Q8IU60 420 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 CBARPQ8N350 705 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 TP53I13Q8NBR0 393 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 BRSK1Q8TDC3 778 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 FBF1Q8TES7 1133 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 DYDC1Q8WWB3 177 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 CENPTQ96BT3 561 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 SMIM14Q96QK8 99 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 KLF6Q99612 283 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 MYOCQ99972 504 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 ZDHHC5Q9C0B5 715 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 NSRP1Q9H0G5 558 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 EBF2Q9HAK2 575 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 FZD3Q9NPG1 666 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 NFKBIL1Q9UBC1 381 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 PKP3Q9Y446 797 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 SPO11Q9Y5K1 396 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 SCN8AQ9UQD0 1980 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 KNL1Q8NG31 2342 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 ADAMTS20P59510 1910 aa13.41□□□□□ -0.26
CSNK1D-220ENST00000581737 TP53BP1Q12888 1972 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 ARHGAP33O14559 1287 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 RAD51BO15315 384 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 KRT38O76015 456 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 SYPP08247 313 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 C1SP09871 688 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 TEAD1P28347 426 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 IGFALSP35858 605 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 HMGCLP35914 325 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 ETV3P41162 512 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 SPINT3P49223 89 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 ATXN3P54252 364 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 DCDC1P59894 354 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 YPEL5P62699 121 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 PTSQ03393 145 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 DPTQ07507 201 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 ILF2Q12905 390 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 PTPRRQ15256 657 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 IRF4Q15306 451 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 TAF1AQ15573 450 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 TRIP6Q15654 476 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 SEPT7Q16181 437 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 CDKN3Q16667 212 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 KCTD19Q17RG1 926 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 WSCD2Q2TBF2 565 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 TNFAIP8L3Q5GJ75 292 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 SPANXN3Q5MJ09 141 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 DENND5AQ6IQ26 1287 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 ESRP1Q6NXG1 681 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 IL27RAQ6UWB1 636 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 GCNT7Q6ZNI0 430 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 CAPN12Q6ZSI9 719 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 Q6ZVL8 140 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 PTAR1Q7Z6K3 402 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 TECPR1Q7Z6L1 1165 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 SLCO6A1Q86UG4 719 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 NLRP8Q86W28 1048 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 LRRC6Q86X45 466 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 TTC30BQ8N4P2 665 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 OR52K1Q8NGK4 314 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 PTCD2Q8WV60 388 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 AP2M1Q96CW1 435 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 MTBPQ96DY7 904 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 KLHDC7BQ96G42 594 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 CRELD1Q96HD1 420 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 SGSM3Q96HU1 749 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 PAFAH2Q99487 392 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 C19orf43Q9BQ61 176 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 IL22Q9GZX6 179 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 SSU72Q9NP77 194 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 CASS4Q9NQ75 786 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 NSMCE4AQ9NXX6 385 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 TXNDC16Q9P2K2 825 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 ZNF180Q9UJW8 692 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 RAXQ9Y2V3 346 aa13.4□□□□□ -0.26
CSNK1D-220ENST00000581737 ADAMTS9Q9P2N4 1935 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 A0A1W2PR77 199 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 STX7O15400 261 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 PCCBP05166 539 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 FTH1P19P0C7X4 201 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 GM2AP17900 193 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 LPOP22079 712 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 SSTR1P30872 391 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 THOP1P52888 689 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 GYS2P54840 703 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 GPX6P59796 221 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 OLIG2Q13516 323 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 ZNF423Q2M1K9 1284 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 MSS51Q4VC12 460 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 STEAP4Q687X5 459 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 ADGRD1Q6QNK2 874 aa13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 CAND1Q86VP6 1230 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-220ENST00000581737 SLC26A11Q86WA9 606 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms