RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ZNF8	P17098	575 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	VCL	P18206	1134 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CD1C	P29017	333 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ALDH4A1	P30038	563 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	UGT1A5	P35504	534 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SPAM1	P38567	509 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	EPHA4	P54764	986 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TLE3	Q04726	772 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	MAP9	Q49MG5	647 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ANKRD20A2	Q5SQ80	823 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LDLRAP1	Q5SW96	308 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ANKRD20A1	Q5TYW2	823 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ANKRD20A3	Q5VUR7	823 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ALS2CL	Q60I27	953 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	DARS2	Q6PI48	645 aa	Known RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	C19orf48	Q6RUI8	117 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	WASH2P	Q6VEQ5	465 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	GLT6D1	Q7Z4J2	308 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	B3GNT8	Q7Z7M8	397 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ADGRG6	Q86SQ4	1221 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SLC9B2	Q86UD5	537 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LRRTM4	Q86VH4	590 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SPACA3	Q8IXA5	215 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	IPMK	Q8NFU5	416 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KCNE4	Q8WWG9	221 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	HES6	Q96HZ4	224 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZNF514	Q96K75	400 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	OR2AG1	Q9H205	316 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	UCK1	Q9HA47	277 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ARNT2	Q9HBZ2	717 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	IL26	Q9NPH9	171 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	WASH6P	Q9NQA3	447 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SMOX	Q9NWM0	555 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PDP2	Q9P2J9	529 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TBC1D29	Q9UFV1	150 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZFHX4	Q86UP3	3567 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CELSR3	Q9NYQ7	3312 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CACNA1G	O43497	2377 aa		12.44	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SCN8A	Q9UQD0	1980 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	IGHV1OR21-1	A0A087WYE8	117 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	C2orf81	A6NN90	581 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	AURKA	O14965	403 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PPM1D	O15297	605 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KCNN4	O15554	427 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ARHGAP6	O43182	974 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CDK14	O94921	469 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	JMJD7	P0C870	316 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ACP5	P13686	325 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CD82	P27701	267 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ADRA1A	P35348	466 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LIMK2	P53671	638 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	OR1D5	P58170	312 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KLF1	Q13351	362 aa	Predicted RBP	12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	GTF2H3	Q13889	308 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TAF1A	Q15573	450 aa	Predicted RBP	12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ATP13A5	Q4VNC0	1218 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	AGAP9	Q5VTM2	703 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	WDR74	Q6RFH5	385 aa	Predicted RBP	12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZNF662	Q6ZS27	426 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SFTPA2	Q8IWL1	248 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	RBM12B	Q8IXT5	1001 aa	Known RBP	12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LSM14A	Q8ND56	463 aa	Known RBP	12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	OR10G6	Q8NH81	332 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SLC37A2	Q8TED4	501 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TTC25	Q96NG3	672 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SLC38A3	Q99624	504 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	FOXP3	Q9BZS1	431 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PRORY	Q9H606	182 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KCNK4	Q9NYG8	393 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PLEKHM1	Q9Y4G2	1056 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LOXL2	Q9Y4K0	774 aa		12.43	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	GLYATL1P3	A0A0U1RQE8	302 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TEX51	A0A1B0GUA7	166 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LILRA5	A6NI73	299 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PRR19	A6NJB7	356 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	STX7	O15400	261 aa	Known RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	DDX3Y	O15523	660 aa	Known RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PSMD3	O43242	534 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	DUX1	O43812	170 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CRTAM	O95727	393 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SLC4A1	P02730	911 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ZNF7	P17097	686 aa	Predicted RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	XRCC1	P18887	633 aa	Predicted RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	LPO	P22079	712 aa	Predicted RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	STIP1	P31948	543 aa	Known RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CHRNA4	P43681	627 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TMPRSS3	P57727	454 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	HHEX	Q03014	270 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	CCDC173	Q0VFZ6	552 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TMEM115	Q12893	351 aa	Predicted RBP	12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	KIF26B	Q2KJY2	2108 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	PARP6	Q2NL67	630 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	P3H1	Q32P28	736 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	TMEM164	Q5U3C3	297 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	ABRAXAS1	Q6UWZ7	409 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SLC25A41	Q8N5S1	370 aa		12.42	□□□□□ -0.42
CDK5RAP3-222	ENST00000581708	SPC24	Q8NBT2	197 aa		12.42	□□□□□ -0.42

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