RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 TRA2AQ13595 282 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 KIR2DS5Q14953 304 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 RANBP10Q6VN20 620 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 ZNF574Q6ZN55 896 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 KLHDC8BQ8IXV7 354 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 AVL9Q8NBF6 648 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 IPMKQ8NFU5 416 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 OR4D9Q8NGE8 314 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 SNRNP27Q8WVK2 155 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 GORASP1Q9BQQ3 440 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 OR2AG1Q9H205 316 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 PDP2Q9P2J9 529 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 AMFRQ9UKV5 643 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 TMPRSS11EQ9UL52 423 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 AAR2Q9Y312 384 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 PRKAB1Q9Y478 270 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 LOXL2Q9Y4K0 774 aa16.76■□□□□ 0.27
CDC42EP4-206ENST00000581014 GOLGA6L6A8MZA4 724 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 ACP5P13686 325 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 F3P13726 295 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 ADRA1AP35348 466 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 CHRNA4P43681 627 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 GEMP55040 296 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 EIF3EP60228 445 aaKnown RBP16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 AMZ1Q400G9 498 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 MAP9Q49MG5 647 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 ATP13A5Q4VNC0 1218 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 PEX26Q7Z412 305 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 RNF10Q8N5U6 811 aaKnown RBP16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 UBL4BQ8N7F7 174 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 BRSK1Q8TDC3 778 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 SH3KBP1Q96B97 665 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 SPATA13Q96N96 652 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 PPP1R2P1Q96PQ5 205 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 C19orf43Q9BQ61 176 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 NUDT22Q9BRQ3 303 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 TIMM29Q9BSF4 260 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 SEMA6CQ9H3T2 930 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 RDH14Q9HBH5 336 aa16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 FASNP49327 2511 aaKnown RBP16.75■□□□□ 0.27
CDC42EP4-206ENST00000581014 IGHV5-10-1A0A0J9YXX1 117 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 KMOO15229 486 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 STK10O94804 968 aaKnown RBP16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 JMJD7P0C870 316 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 SPAM1P38567 509 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 LIMK2P53671 638 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 GSDMDP57764 484 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 CFHR1Q03591 330 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 KLF1Q13351 362 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 ANKRD20A2Q5SQ80 823 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 ANKRD20A1Q5TYW2 823 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 ANKRD20A3Q5VUR7 823 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 BROXQ5VW32 411 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 FOXR1Q6PIV2 292 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 USP53Q70EK8 1073 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 LRRTM4Q86VH4 590 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 ZNF547Q8IVP9 402 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 SLC25A41Q8N5S1 370 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 TTC13Q8NBP0 860 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 FSD1LQ9BXM9 530 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 C10orf88Q9H8K7 445 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 UCK1Q9HA47 277 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 KCNK4Q9NYG8 393 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 KCNK6Q9Y257 313 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 SCN8AQ9UQD0 1980 aa16.74■□□□□ 0.27
CDC42EP4-206ENST00000581014 TEX51A0A1B0GUA7 166 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 MACROD2A1Z1Q3 448 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 C5orf60A6NFR6 353 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 DDX3YO15523 660 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 KLK10O43240 276 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 KCNJ13O60928 360 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 CDK14O94921 469 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 SLC4A1P02730 911 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 SLC5A2P31639 672 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 EPHA4P54764 986 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 TMPRSS3P57727 454 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 HHEXQ03014 270 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 MSLNQ13421 630 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 C16orf72Q14CZ0 275 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 KHDC1Q4VXA5 237 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 ZNF648Q5T619 568 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 AADACL2Q6P093 401 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 TMEM71Q6P5X7 295 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 DARS2Q6PI48 645 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 WDR74Q6RFH5 385 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 WASH2PQ6VEQ5 465 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 GPR155Q7Z3F1 870 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 GLT6D1Q7Z4J2 308 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 SLC9B2Q86UD5 537 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 LSM14AQ8ND56 463 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 BLOC1S5Q8TDH9 187 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 HES6Q96HZ4 224 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 FCRL3Q96P31 734 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 UBL7Q96S82 380 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 SLC38A3Q99624 504 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 DESI2Q9BSY9 194 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 EPB41L1Q9H4G0 881 aa16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 STN1Q9H668 368 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-206ENST00000581014 ARNT2Q9HBZ2 717 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms