RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 HIPK4Q8NE63 616 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 OR4L1Q8NH43 312 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 UCMAQ8WVF2 138 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CCDC124Q96CT7 223 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 UBE2ZQ9H832 354 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KCNK12Q9HB15 430 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZFYVE1Q9HBF4 777 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NLE1Q9NVX2 485 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 IL17CQ9P0M4 197 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ITM2BQ9Y287 266 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 OR1I1O60431 355 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SOCS5O75159 536 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SERPINA6P08185 405 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 UGT1A6P19224 532 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CD72P21854 359 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 UGT1A1P22309 533 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 UGT1A4P22310 534 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MC4RP32245 332 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 UGT1A3P35503 534 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 UGT1A5P35504 534 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RAB10P61026 200 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ACVR1Q04771 509 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MUM1Q2TAK8 710 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 C9orf64Q5T6V5 341 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LRRC66Q68CR7 880 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CNTN4Q8IWV2 1026 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 OMDQ99983 421 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MFSD1Q9H3U5 465 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 DCLRE1BQ9H816 532 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MAGEE1Q9HCI5 957 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CD84Q9UIB8 345 aa12.6□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SPECC1L-ADORA2AF8WAN1 911 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC7A4O43246 635 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NARSO43776 548 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PDE5AO76074 875 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PSMG1O95456 288 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 S1PR4O95977 384 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 EPHX1P07099 455 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MAPK8P45983 427 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TFF2Q03403 129 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RAD51Q06609 339 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 C2orf27AQ580R0 203 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZRANB3Q5FWF4 1079 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 APLFQ8IW19 511 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KBTBD2Q8IY47 623 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 FSTL5Q8N475 847 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CCNYL1Q8N7R7 359 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 WFIKKN2Q8TEU8 576 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NXNL1Q96CM4 212 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SCRN2Q96FV2 425 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PANX3Q96QZ0 392 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CCDC106Q9BWC9 280 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GATA5Q9BWX5 397 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CPEB1Q9BZB8 566 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 EPS15L1Q9UBC2 864 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 B4GALT6Q9UBX8 382 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 IL36AQ9UHA7 158 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC7A8Q9UHI5 535 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ANKRD6Q9Y2G4 727 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GOLGA8QA0A0J9YX86 632 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GOLGA8OA6NCC3 632 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ANHXE9PGG2 379 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 GOLGA8NF8WBI6 632 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NEMP1O14524 444 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MBTPS2O43462 519 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CHRNGP07510 517 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SRPRAP08240 638 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TIE1P35590 1138 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HMGCLP35914 325 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 IDH3AP50213 366 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NAGLUP54802 743 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TAS2R39P59534 338 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ROR2Q01974 943 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PTSQ03393 145 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TUBB3Q13509 450 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LRRC36Q1X8D7 754 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MMAAQ8IVH4 418 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KIAA1958Q8N8K9 716 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NECTIN4Q96NY8 510 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TTC1Q99614 292 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 OLFM1Q99784 485 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CATSPERZQ9NTU4 200 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TAGLN3Q9UI15 199 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 MID2Q9UJV3 735 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 SLC8A2Q9UPR5 921 aa12.59□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CAPN8A6NHC0 703 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 E9PBE3 544 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 NVLO15381 856 aaKnown RBP12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 KLHL41O60662 606 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 TIMP2P16035 220 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 ZNF16P17020 682 aaPredicted RBP12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PMLP29590 882 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 CSHL1Q14406 222 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 HNRNPA1L2Q32P51 320 aaKnown RBP12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 LRRC8EQ6NSJ5 796 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 RIPOR1Q6ZS17 1223 aa12.58□□□□□ -0.39
CDK5RAP3-217ENST00000580287 PIM3Q86V86 326 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms