RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 MRGPRX2Q96LB1 330 aa16.31■□□□□ 0.2
TVP23B-206ENST00000574226 FCRL3Q96P31 734 aaPredicted RBP16.31■□□□□ 0.2
TVP23B-206ENST00000574226 SLC38A3Q99624 504 aa16.31■□□□□ 0.2
TVP23B-206ENST00000574226 ZCCHC2Q9C0B9 1178 aaKnown RBP16.31■□□□□ 0.2
TVP23B-206ENST00000574226 OR2AG1Q9H205 316 aa16.31■□□□□ 0.2
TVP23B-206ENST00000574226 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.31■□□□□ 0.2
TVP23B-206ENST00000574226 RALYQ9UKM9 306 aaKnown RBP16.31■□□□□ 0.2
TVP23B-206ENST00000574226 ATXN7L1Q9ULK2 861 aaPredicted RBP16.31■□□□□ 0.2
TVP23B-206ENST00000574226 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
TVP23B-206ENST00000574226 PKP3Q9Y446 797 aa16.31■□□□□ 0.2
TVP23B-206ENST00000574226 LOXL2Q9Y4K0 774 aa16.31■□□□□ 0.2
TVP23B-206ENST00000574226 ATRXP46100 2492 aa16.31■□□□□ 0.2
TVP23B-206ENST00000574226 SCN8AQ9UQD0 1980 aa16.31■□□□□ 0.2
TVP23B-206ENST00000574226 IGHV1OR21-1A0A087WYE8 117 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 MACROD2A1Z1Q3 448 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 KLK10O43240 276 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 KCNJ13O60928 360 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 SLC4A1P02730 911 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
TVP23B-206ENST00000574226 RBP3P10745 1247 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 ACP5P13686 325 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 ZNF8P17098 575 aaPredicted RBP16.3■□□□□ 0.2
TVP23B-206ENST00000574226 VCLP18206 1134 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 CD82P27701 267 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 RBL1P28749 1068 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 CD1CP29017 333 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 LIMK2P53671 638 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 EIF3EP60228 445 aaKnown RBP16.3■□□□□ 0.2
TVP23B-206ENST00000574226 PDE1BQ01064 536 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 HHEXQ03014 270 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 ITGA9Q13797 1035 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.3■□□□□ 0.2
TVP23B-206ENST00000574226 GLT6D1Q7Z4J2 308 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 LRRTM4Q86VH4 590 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 RNF10Q8N5U6 811 aaKnown RBP16.3■□□□□ 0.2
TVP23B-206ENST00000574226 ACRBPQ8NEB7 543 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 CCDC112Q8NEF3 446 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 IPMKQ8NFU5 416 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 SLC37A2Q8TED4 501 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 PATE1Q8WXA2 126 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 AHCYL2Q96HN2 611 aaKnown RBP16.3■□□□□ 0.2
TVP23B-206ENST00000574226 OXNAD1Q96HP4 312 aaPredicted RBP16.3■□□□□ 0.2
TVP23B-206ENST00000574226 TTC25Q96NG3 672 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 C19orf43Q9BQ61 176 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 TIMM29Q9BSF4 260 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 IL17CQ9P0M4 197 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 TBC1D29Q9UFV1 150 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 FEZ2Q9UHY8 353 aaPredicted RBP16.3■□□□□ 0.2
TVP23B-206ENST00000574226 PLEKHM1Q9Y4G2 1056 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 SPO11Q9Y5K1 396 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
TVP23B-206ENST00000574226 GRID2IPA4D2P6 1211 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 TK2O00142 265 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 CASC3O15234 703 aaKnown RBP16.29■□□□□ 0.2
TVP23B-206ENST00000574226 DUX1O43812 170 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 CDK14O94921 469 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 SLC5A2P31639 672 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 SPAM1P38567 509 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 EPHA4P54764 986 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 GTF2H3Q13889 308 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 LDLRAP1Q5SW96 308 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 TMEM71Q6P5X7 295 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 DARS2Q6PI48 645 aaKnown RBP16.29■□□□□ 0.2
TVP23B-206ENST00000574226 WDR74Q6RFH5 385 aaPredicted RBP16.29■□□□□ 0.2
TVP23B-206ENST00000574226 ADGRG6Q86SQ4 1221 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 JAMLQ86YT9 394 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 TMEM139Q8IV31 216 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 TTC30BQ8N4P2 665 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 SNRNP27Q8WVK2 155 aaKnown RBP16.29■□□□□ 0.2
TVP23B-206ENST00000574226 NAF1Q96HR8 494 aaKnown RBP16.29■□□□□ 0.2
TVP23B-206ENST00000574226 UCK1Q9HA47 277 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 RDH14Q9HBH5 336 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 IL26Q9NPH9 171 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 PISDQ9UG56 409 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 KCNK6Q9Y257 313 aa16.29■□□□□ 0.2
TVP23B-206ENST00000574226 A6NCN8 305 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 C5orf60A6NFR6 353 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 C2orf81A6NN90 581 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 AURKAO14965 403 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 PYGMP11217 842 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 ZNF7P17097 686 aaPredicted RBP16.28■□□□□ 0.2
TVP23B-206ENST00000574226 GSDMDP57764 484 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 INSCQ1MX18 579 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 ATP13A5Q4VNC0 1218 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 ANKRD20A2Q5SQ80 823 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 ANKRD20A1Q5TYW2 823 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 ANKRD20A3Q5VUR7 823 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 WASH2PQ6VEQ5 465 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 RANBP10Q6VN20 620 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 USP53Q70EK8 1073 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 SLC25A41Q8N5S1 370 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 AGBL5Q8NDL9 886 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 GDAP1Q8TB36 358 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 BLOC1S5Q8TDH9 187 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 ALG3Q92685 438 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 ZNF514Q96K75 400 aaPredicted RBP16.28■□□□□ 0.2
TVP23B-206ENST00000574226 SPATA13Q96N96 652 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 NUDT22Q9BRQ3 303 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 TSGA10Q9BZW7 698 aa16.28■□□□□ 0.2
TVP23B-206ENST00000574226 SEMA6CQ9H3T2 930 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms