RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 STMND1H3BQB6 276 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 KIR2DS3K7RE56 304 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 AURKAO14965 403 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 LCA5LO95447 670 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 GPR89BP0CG08 455 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 NFKB1P19838 968 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 CD68P34810 354 aaPredicted RBP17.11■□□□□ 0.33
LITAF-211ENST00000572255 MARCKSL1P49006 195 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 ARSDP51689 593 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 CLCNKAP51800 687 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 ADCY2Q08462 1091 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 KIR2DS5Q14953 304 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 TFDP3Q5H9I0 405 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 WDR74Q6RFH5 385 aaPredicted RBP17.11■□□□□ 0.33
LITAF-211ENST00000572255 CRTC3Q6UUV7 619 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 KDELC1Q6UW63 502 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 ZNF605Q86T29 641 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 SLC9B2Q86UD5 537 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 KATNAL2Q8IYT4 538 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 P3H4Q92791 437 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 ART4Q93070 314 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 OSGEPL1Q9H4B0 414 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 PRDM8Q9NQV8 689 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 FAM153AQ9UHL3 310 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 TENM4Q6N022 2769 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 hCG_1818297A0A087WSY0 165 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 OR5K4A6NMS3 321 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 CHUKO15111 745 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 MTSS1O43312 755 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 ZRANB2O95218 330 aaKnown RBP eCLIP17.1■□□□□ 0.33
LITAF-211ENST00000572255 PLA2G2AP14555 144 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 MAPK9P45984 424 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 EPHA4P54764 986 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 WNT3AP56704 352 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 NOMO1Q15155 1222 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 SNAP47Q5SQN1 464 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 ZC3H18Q86VM9 953 aaKnown RBP17.1■□□□□ 0.33
LITAF-211ENST00000572255 FAM129CQ86XR2 697 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 JPH3Q8WXH2 748 aaPredicted RBP17.1■□□□□ 0.33
LITAF-211ENST00000572255 NCSTNQ92542 709 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 HAUS1Q96CS2 278 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 MED8Q96G25 268 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 PLEKHG4BQ96PX9 1271 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 DDA1Q9BW61 102 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.1■□□□□ 0.33
LITAF-211ENST00000572255 BPIFA1Q9NP55 256 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 OCIAD1Q9NX40 245 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 SLC39A1Q9NY26 324 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 KLHL8Q9P2G9 620 aaPredicted RBP17.1■□□□□ 0.33
LITAF-211ENST00000572255 CPNE7Q9UBL6 633 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 SLC23A2Q9UGH3 650 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 PCDHGA4Q9Y5G9 962 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 PCDHA13Q9Y5I0 950 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 B3GALT1Q9Y5Z6 326 aa17.1■□□□□ 0.33
LITAF-211ENST00000572255 LOC285095A0A1B0GVY8 99 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 EFCAB7A8K855 629 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 A8MU76 341 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 B4E171 279 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 F5H423 210 aaPredicted RBP17.09■□□□□ 0.33
LITAF-211ENST00000572255 KMOO15229 486 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 VEGFDO43915 354 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 WT1P19544 449 aaPredicted RBP17.09■□□□□ 0.33
LITAF-211ENST00000572255 TSPAN7P41732 249 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 UBE2IP63279 158 aaKnown RBP17.09■□□□□ 0.33
LITAF-211ENST00000572255 INSCQ1MX18 579 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 PLA2G4EQ3MJ16 856 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 KHDC1Q4VXA5 237 aaKnown RBP17.09■□□□□ 0.33
LITAF-211ENST00000572255 SIRPB2Q5JXA9 342 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 C11orf63Q6NUN7 778 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 ARHGAP22Q7Z5H3 698 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 LRRTM4Q86VH4 590 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 CCDC50Q8IVM0 306 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 CCDC170Q8IYT3 715 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 RCOR2Q8IZ40 523 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 ZNF567Q8N184 647 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 ZSCAN1Q8NBB4 408 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 AVL9Q8NBF6 648 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 OXNAD1Q96HP4 312 aaPredicted RBP17.09■□□□□ 0.33
LITAF-211ENST00000572255 QKIQ96PU8 341 aaKnown RBP eCLIP17.09■□□□□ 0.337e-9■■■■■ 34.6
LITAF-211ENST00000572255 VPS35Q96QK1 796 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 TBC1D10AQ9BXI6 508 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 ASPSCR1Q9BZE9 553 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 TMPRSS11EQ9UL52 423 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 BOD1L1Q8NFC6 3051 aa17.09■□□□□ 0.33
LITAF-211ENST00000572255 LILRA5A6NI73 299 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 MTX2O75431 263 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 EPOP01588 193 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 ZNF7P17097 686 aaPredicted RBP17.08■□□□□ 0.32
LITAF-211ENST00000572255 HMGCLP35914 325 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 CHRNA4P43681 627 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
LITAF-211ENST00000572255 ATP1A2P50993 1020 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 RAB15P59190 212 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 SPA17Q15506 151 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 ATP13A5Q4VNC0 1218 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 PID1Q7Z2X4 250 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 TTC30BQ8N4P2 665 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 SLC25A41Q8N5S1 370 aa17.08■□□□□ 0.32
LITAF-211ENST00000572255 BMPERQ8N8U9 685 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms