RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NKAPQ8N5F7 415 aaKnown RBP7□□□□□ -1.29
SMG1-215ENST00000568239 PTGR2Q8N8N7 351 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 OR6Y1Q8NGX8 325 aa7□□□□□ -1.29
SMG1-215ENST00000568239 GIMAP7Q8NHV1 300 aa7□□□□□ -1.29
SMG1-215ENST00000568239 CD200R1Q8TD46 325 aa7□□□□□ -1.29
SMG1-215ENST00000568239 UCMAQ8WVF2 138 aa7□□□□□ -1.29
SMG1-215ENST00000568239 SUSD6Q92537 303 aa7□□□□□ -1.29
SMG1-215ENST00000568239 MCCC1Q96RQ3 725 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 WRAP53Q9BUR4 548 aaKnown RBP7□□□□□ -1.29
SMG1-215ENST00000568239 OSBPL1AQ9BXW6 950 aa7□□□□□ -1.29
SMG1-215ENST00000568239 NUF2Q9BZD4 464 aa7□□□□□ -1.29
SMG1-215ENST00000568239 CDH19Q9H159 772 aa7□□□□□ -1.29
SMG1-215ENST00000568239 POPDC3Q9HBV1 291 aa7□□□□□ -1.29
SMG1-215ENST00000568239 TXLNGQ9NUQ3 528 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PKD2L2Q9NZM6 624 aa7□□□□□ -1.29
SMG1-215ENST00000568239 CLEC1BQ9P126 229 aa7□□□□□ -1.29
SMG1-215ENST00000568239 ZDHHC2Q9UIJ5 367 aa7□□□□□ -1.29
SMG1-215ENST00000568239 SARDHQ9UL12 918 aa7□□□□□ -1.29
SMG1-215ENST00000568239 G3BP2Q9UN86 482 aaKnown RBP7□□□□□ -1.29
SMG1-215ENST00000568239 RAP2CQ9Y3L5 183 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PCDHB1Q9Y5F3 818 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PRSS21Q9Y6M0 314 aa7□□□□□ -1.29
SMG1-215ENST00000568239 TMEM233B4DJY2 109 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PLK4O00444 970 aa7□□□□□ -1.29
SMG1-215ENST00000568239 TBX10O75333 385 aa7□□□□□ -1.29
SMG1-215ENST00000568239 WISP3O95389 354 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 EPHX1P07099 455 aa7□□□□□ -1.29
SMG1-215ENST00000568239 TIMP2P16035 220 aa7□□□□□ -1.29
SMG1-215ENST00000568239 VIPR1P32241 457 aa7□□□□□ -1.29
SMG1-215ENST00000568239 SOX9P48436 509 aa7□□□□□ -1.29
SMG1-215ENST00000568239 ACOX1Q15067 660 aa7□□□□□ -1.29
SMG1-215ENST00000568239 GAB4Q2WGN9 574 aa7□□□□□ -1.29
SMG1-215ENST00000568239 GPR33Q49SQ1 333 aa7□□□□□ -1.29
SMG1-215ENST00000568239 SEL1L3Q68CR1 1132 aa7□□□□□ -1.29
SMG1-215ENST00000568239 NXNQ6DKJ4 435 aa7□□□□□ -1.29
SMG1-215ENST00000568239 ERAP2Q6P179 960 aa7□□□□□ -1.29
SMG1-215ENST00000568239 TMEM184AQ6ZMB5 413 aa7□□□□□ -1.29
SMG1-215ENST00000568239 MAVSQ7Z434 540 aa7□□□□□ -1.29
SMG1-215ENST00000568239 HSD11B1LQ7Z5J1 315 aa7□□□□□ -1.29
SMG1-215ENST00000568239 RAB44Q7Z6P3 723 aaPredicted RBP7□□□□□ -1.29
SMG1-215ENST00000568239 SLC22A9Q8IVM8 553 aa7□□□□□ -1.29
SMG1-215ENST00000568239 PLPP6Q8IY26 295 aa7□□□□□ -1.29
SMG1-215ENST00000568239 NXPE1Q8N323 547 aa7□□□□□ -1.29
SMG1-215ENST00000568239 OR8D1Q8WZ84 308 aa7□□□□□ -1.29
SMG1-215ENST00000568239 SKA1Q96BD8 255 aa7□□□□□ -1.29
SMG1-215ENST00000568239 CHFRQ96EP1 664 aa7□□□□□ -1.29
SMG1-215ENST00000568239 COPS8Q99627 209 aa7□□□□□ -1.29
SMG1-215ENST00000568239 TRMT61BQ9BVS5 477 aaKnown RBP7□□□□□ -1.29
SMG1-215ENST00000568239 CACNA2D2Q9NY47 1150 aa7□□□□□ -1.29
SMG1-215ENST00000568239 OBP2AQ9NY56 170 aa7□□□□□ -1.29
SMG1-215ENST00000568239 FAM8A1Q9UBU6 413 aa7□□□□□ -1.29
SMG1-215ENST00000568239 IKZF3Q9UKT9 509 aa7□□□□□ -1.29
SMG1-215ENST00000568239 STK38LQ9Y2H1 464 aa7□□□□□ -1.29
SMG1-215ENST00000568239 OAS3Q9Y6K5 1087 aaKnown RBP7□□□□□ -1.29
SMG1-215ENST00000568239 E9PBE3 544 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 KLHL41O60662 606 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 SNX2O60749 519 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 CCDC22O60826 627 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 SKAP2O75563 359 aaPredicted RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 UNC5CO95185 931 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 KAT7O95251 611 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 PRNPP04156 253 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ELFN1P0C7U0 828 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ARL1P40616 181 aaPredicted RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 IDH3AP50213 366 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ATP6V0D1P61421 351 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 NCALDP61601 193 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 FCHO2Q0JRZ9 810 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ADAM15Q13444 863 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 UBAP2LQ14157 1087 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 EIF4HQ15056 248 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 FRA10AC1Q70Z53 315 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 PARS2Q7L3T8 475 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 MMAAQ8IVH4 418 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 CHPFQ8IZ52 775 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 CBARPQ8N350 705 aaPredicted RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 FBXO39Q8N4B4 442 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 PIP4K2CQ8TBX8 421 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 MAPK15Q8TD08 544 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 SKA2Q8WVK7 121 aaPredicted RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 KIAA1191Q96A73 305 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ESAMQ96AP7 390 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 RIPOR3Q96MK2 946 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ACOX2Q99424 681 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 SIKE1Q9BRV8 207 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 DERL2Q9GZP9 239 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 P2RY12Q9H244 342 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 FAM83DQ9H4H8 585 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 TFB2MQ9H5Q4 396 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 WDR55Q9H6Y2 383 aaPredicted RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 TRPV4Q9HBA0 871 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 DYRK4Q9NR20 520 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 LATS2Q9NRM7 1088 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 PPIL1Q9Y3C6 166 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 EDDM13A0A1B0GTR0 161 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 LRRC14BA6NHZ5 514 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 FSBPO95073 299 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ENO1P06733 434 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 IMPDH1P20839 514 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 EPHA3P29320 983 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms