RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PRR19A6NJB7 356 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 OR5K4A6NMS3 321 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 POLR1CO15160 346 aaPredicted RBP16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 C9P02748 559 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 GYPCP04921 128 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 ANKRD34CP0C6C1 535 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 SLC2A4P14672 509 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 STAT5AP42229 794 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 IFI35P80217 286 aaPredicted RBP16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 PPIDQ08752 370 aaKnown RBP16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 IGFBP7Q16270 282 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 DEFB109BQ30KR1 87 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 PLA2G4EQ3MJ16 856 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 CRTC3Q6UUV7 619 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 PHYKPLQ8IUZ5 450 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 PLD5Q8N7P1 536 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 STARD8Q92502 1023 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 KIAA1143Q96AT1 154 aaPredicted RBP16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 C9orf72Q96LT7 481 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 RNF157Q96PX1 679 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 SPATA16Q9BXB7 569 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 CEP41Q9BYV8 373 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 ZFYVE1Q9HBF4 777 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 CTTNBP2NLQ9P2B4 639 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF624Q9P2J8 865 aaPredicted RBP16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 SHOC2Q9UQ13 582 aa16.57■□□□□ 0.24
HDGFL3-203ENST00000563404 CHUKO15111 745 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 SLC25A14O95258 325 aaPredicted RBP16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 TYRP1P17643 537 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 XRCC1P18887 633 aaPredicted RBP16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 KDELR1P24390 212 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 SLC19A1P41440 591 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 SH3BP2P78314 561 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 KHDC1Q4VXA5 237 aaKnown RBP16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF569Q5MCW4 686 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 TMEM26Q6ZUK4 368 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 KDELC2Q7Z4H8 507 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 TMC3Q7Z5M5 1100 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 LUZP1Q86V48 1076 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 PLXDC1Q8IUK5 500 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 MAP7D3Q8IWC1 876 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 C9orf43Q8TAL5 461 aaPredicted RBP16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 EFHD1Q9BUP0 239 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 ADGRE3Q9BY15 652 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 OSGEPL1Q9H4B0 414 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 EPB41L1Q9H4G0 881 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 UCK1Q9HA47 277 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 CBX8Q9HC52 389 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 TRIM39Q9HCM9 518 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 HAUS2Q9NVX0 235 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 TMPRSS11EQ9UL52 423 aa16.56■□□□□ 0.24
HDGFL3-203ENST00000563404 NBPF19A0A087WUL8 3843 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 C3orf70A6NLC5 250 aaPredicted RBP16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 MTX2O75431 263 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 KRT7P08729 469 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 BRAFP15056 766 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 MAN1A1P33908 653 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 CASRP41180 1078 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 LEPRP48357 1165 aaKnown RBP16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 UBASH3AP57075 661 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 DCDC1P59894 354 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 FOXK1P85037 733 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 MAP7Q14244 749 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 C16orf46Q6P387 395 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 NPNTQ6UXI9 565 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF547Q8IVP9 402 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 TRAM1L1Q8N609 369 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 GLYATL1Q969I3 302 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 TADA1Q96BN2 335 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 IMP4Q96G21 291 aaKnown RBP16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 ABHD17AQ96GS6 310 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 TGM7Q96PF1 710 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 TRIT1Q9H3H1 467 aaKnown RBP16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 UVRAGQ9P2Y5 699 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 NFKBIL1Q9UBC1 381 aaPredicted RBP16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 RPS6KL1Q9Y6S9 549 aa16.55■□□□□ 0.24
HDGFL3-203ENST00000563404 DOPEY2Q9Y3R5 2298 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 SYCE3A1L190 88 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 KIF1CO43896 1103 aaKnown RBP16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 UBXN7O94888 489 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 SLC4A1P02730 911 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 FURINP09958 794 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF7P17097 686 aaPredicted RBP16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 BPIP17213 487 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 TCN2P20062 427 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 SEPHS1P49903 392 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 FOXM1Q08050 763 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 SEPT7Q16181 437 aaKnown RBP16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 CRTC2Q53ET0 693 aaPredicted RBP16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 B4GALNT4Q76KP1 1039 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 ESX1Q8N693 406 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 APOBEC4Q8WW27 367 aaKnown RBP16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 RSC1A1Q92681 617 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 AGAP3Q96P47 875 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 ZSCAN5AQ9BUG6 496 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 MAGEE1Q9HCI5 957 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 ANAPC2Q9UJX6 822 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 DNAJC16Q9Y2G8 782 aa16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 LUC7L2Q9Y383 392 aaKnown RBP16.54■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF711Q9Y462 761 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms