RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 KLC4Q9NSK0 619 aa17.18■□□□□ 0.34
CRTC3-208ENST00000560098 MN1Q10571 1320 aaPredicted RBP17.18■□□□□ 0.34
CRTC3-208ENST00000560098 CYSRT1A8MQ03 144 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 GPR89AB7ZAQ6 455 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 ANKRD34CP0C6C1 535 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 GPR89BP0CG08 455 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 PRKAR1AP10644 381 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 DCDC1P59894 354 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 KDELC2Q7Z4H8 507 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 PLD5Q8N7P1 536 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 GPR26Q8NDV2 337 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 TRIB3Q96RU7 358 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 PACSIN1Q9BY11 444 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 UCK1Q9HA47 277 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 RAD18Q9NS91 495 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 SHOC2Q9UQ13 582 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 HEY1Q9Y5J3 304 aa17.17■□□□□ 0.34
CRTC3-208ENST00000560098 MTA2O94776 668 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 XRCC1P18887 633 aaPredicted RBP17.16■□□□□ 0.34
CRTC3-208ENST00000560098 CASP14P31944 242 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 NOP2P46087 812 aaKnown RBP17.16■□□□□ 0.34
CRTC3-208ENST00000560098 AP1B1Q10567 949 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 CDC20Q12834 499 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 SLC18A3Q16572 532 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 PDPK2PQ6A1A2 396 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 CRTC3Q6UUV7 619 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 TMC3Q7Z5M5 1100 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 ADGRG6Q86SQ4 1221 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 TRAM1L1Q8N609 369 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.16■□□□□ 0.34
CRTC3-208ENST00000560098 GLYATL1Q969I3 302 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 IMP4Q96G21 291 aaKnown RBP17.16■□□□□ 0.34
CRTC3-208ENST00000560098 C9orf72Q96LT7 481 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 CEP41Q9BYV8 373 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 MAGEE1Q9HCI5 957 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 SIDT1Q9NXL6 827 aaKnown RBP17.16■□□□□ 0.34
CRTC3-208ENST00000560098 OGFRQ9NZT2 677 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 SCHIP1Q9P0W5 487 aaPredicted RBP17.16■□□□□ 0.34
CRTC3-208ENST00000560098 NFKBIL1Q9UBC1 381 aaPredicted RBP17.16■□□□□ 0.34
CRTC3-208ENST00000560098 SLC23A2Q9UGH3 650 aa17.16■□□□□ 0.34
CRTC3-208ENST00000560098 MAST4O15021 2626 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 SYCE3A1L190 88 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 LRRD1A4D1F6 860 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 ZNF487B1APH4 448 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 GOLGA6L19H0YKK7 550 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 CHUKO15111 745 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 DLGAP3O95886 979 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 VIPP01282 170 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 SLC4A1P02730 911 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 C9P02748 559 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 PIRTP0C851 137 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 HNRNPH3P31942 346 aaKnown RBP17.15■□□□□ 0.34
CRTC3-208ENST00000560098 GFERP55789 205 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 INSCQ1MX18 579 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 FAM182AQ5T1J6 154 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 SLC9A4Q6AI14 798 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 TMEM26Q6ZUK4 368 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 NT5DC3Q86UY8 548 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 ESX1Q8N693 406 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 STARD8Q92502 1023 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 AGAP3Q96P47 875 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 GPR63Q9BZJ6 419 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 IFNKQ9P0W0 207 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 ZNF711Q9Y462 761 aa17.15■□□□□ 0.34
CRTC3-208ENST00000560098 KMOO15229 486 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 UBXN7O94888 489 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 TYRP1P17643 537 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 OAS2P29728 719 aaKnown RBP17.14■□□□□ 0.33
CRTC3-208ENST00000560098 SLC19A1P41440 591 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 STAT5AP42229 794 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 MC1RQ01726 317 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 CDK18Q07002 472 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 MAP7Q14244 749 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 MESDQ14696 234 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 PDK1Q15118 436 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 PCSK7Q16549 785 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 PLA2G4EQ3MJ16 856 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 LRRTM4Q86VH4 590 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 VSIG1Q86XK7 387 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 TRIM48Q8IWZ4 208 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 C9orf43Q8TAL5 461 aaPredicted RBP17.14■□□□□ 0.33
CRTC3-208ENST00000560098 TIMM29Q9BSF4 260 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 MAK16Q9BXY0 300 aaKnown RBP17.14■□□□□ 0.33
CRTC3-208ENST00000560098 BRD8Q9H0E9 1235 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 SLC25A51Q9H1U9 297 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 ZNF624Q9P2J8 865 aaPredicted RBP17.14■□□□□ 0.33
CRTC3-208ENST00000560098 COL12A1Q99715 3063 aa17.14■□□□□ 0.33
CRTC3-208ENST00000560098 C3orf70A6NLC5 250 aaPredicted RBP17.13■□□□□ 0.33
CRTC3-208ENST00000560098 APOL1O14791 398 aa17.13■□□□□ 0.33
CRTC3-208ENST00000560098 PPP1R12AO14974 1030 aaPredicted RBP17.13■□□□□ 0.33
CRTC3-208ENST00000560098 TOX3O15405 576 aaPredicted RBP17.13■□□□□ 0.33
CRTC3-208ENST00000560098 VEGFDO43915 354 aa17.13■□□□□ 0.33
CRTC3-208ENST00000560098 TMEM253P0C7T8 217 aa17.13■□□□□ 0.33
CRTC3-208ENST00000560098 ZNF7P17097 686 aaPredicted RBP17.13■□□□□ 0.33
CRTC3-208ENST00000560098 AMD1P17707 334 aa17.13■□□□□ 0.33
CRTC3-208ENST00000560098 FOXM1Q08050 763 aa17.13■□□□□ 0.33
CRTC3-208ENST00000560098 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
CRTC3-208ENST00000560098 SKIDA1Q1XH10 827 aa17.13■□□□□ 0.33
CRTC3-208ENST00000560098 ASTE1Q2TB18 679 aaPredicted RBP17.13■□□□□ 0.33
CRTC3-208ENST00000560098 CRTC2Q53ET0 693 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms