RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SNX12Q9UMY4 172 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 RP1P56715 2156 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 GOLGA6L10A0A0M3HER8 536 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 B4DGG1 531 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 AP3B1O00203 1094 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 OPA1O60313 960 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 NOBOXO60393 691 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 CDK14O94921 469 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 PRAMEF1O95521 474 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 APRTP07741 180 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 GLB1P16278 677 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 ZNF8P17098 575 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 TCP1P17987 556 aaKnown RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 AK4P27144 223 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 RPL22P35268 128 aaKnown RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 ACTR1BP42025 376 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 KCNJ1P48048 391 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 ZNF140P52738 457 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 ACTR1AP61163 376 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 GNG11P61952 73 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 C14orf28Q4W4Y0 310 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 SLC30A9Q6PML9 568 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 CHST15Q7LFX5 561 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 ZNF398Q8TD17 642 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 ZDHHC1Q8WTX9 485 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 STYXQ8WUJ0 223 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 MAGOHBQ96A72 148 aaKnown RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 MS4A14Q96JA4 679 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 TTC25Q96NG3 672 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 EIF2B3Q9NR50 452 aaKnown RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 SPATS2LQ9NUQ6 558 aaKnown RBP12.35□□□□□ -0.43
SLIRP-211ENST00000557623 SMOXQ9NWM0 555 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 PYCARDQ9ULZ3 195 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 CLCA2Q9UQC9 943 aa12.35□□□□□ -0.43
SLIRP-211ENST00000557623 ASXL3Q9C0F0 2248 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 CHUKO15111 745 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 KMOO15229 486 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 ZW10O43264 779 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 LDB2O43679 373 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 NUDT21O43809 227 aaKnown RBP12.34□□□□□ -0.43
SLIRP-211ENST00000557623 SRP72O76094 671 aaKnown RBP12.34□□□□□ -0.43
SLIRP-211ENST00000557623 ZSCAN5DPP0CG00 497 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 SLC2A4P14672 509 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 PNLIPP16233 465 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 TPH1P17752 444 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 CLCNKAP51800 687 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 BASP1P80723 227 aaKnown RBP12.34□□□□□ -0.43
SLIRP-211ENST00000557623 TMEM115Q12893 351 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-211ENST00000557623 BIRC2Q13490 618 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 SEPT6Q14141 434 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 HLTFQ14527 1009 aaKnown RBP eCLIP12.34□□□□□ -0.43
SLIRP-211ENST00000557623 PTPRCAPQ14761 206 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 CYP1B1Q16678 543 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 ZNF648Q5T619 568 aaPredicted RBP12.34□□□□□ -0.43
SLIRP-211ENST00000557623 PRUNE1Q86TP1 453 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 LRRTM4Q86VH4 590 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 PARP9Q8IXQ6 854 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 GLIS1Q8NBF1 620 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 DDHD1Q8NEL9 900 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 OR52K1Q8NGK4 314 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 OR13C4Q8NGS5 318 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 COG1Q8WTW3 980 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 ULK4Q96C45 1275 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 CCDC3Q9BQI4 270 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 AP1M1Q9BXS5 423 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 ASB8Q9H765 288 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 ARFGAP3Q9NP61 516 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 FKBPLQ9UIM3 349 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 TMPRSS11EQ9UL52 423 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 PLEKHM1Q9Y4G2 1056 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 KCTD3Q9Y597 815 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 SLC30A1Q9Y6M5 507 aa12.34□□□□□ -0.43
SLIRP-211ENST00000557623 HEATR9A2RTY3 570 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 H7C0S8 307 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 GAPDHSO14556 408 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A9O60656 530 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 KCNJ13O60928 360 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 MTX2O75431 263 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 TCEA3O75764 348 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 MT-CO3P00414 261 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 ACP5P13686 325 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 VCLP18206 1134 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A6P19224 532 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 MSH3P20585 1137 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 ITGALP20701 1170 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A1P22309 533 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A4P22310 534 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A3P35503 534 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A5P35504 534 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 TMPRSS15P98073 1019 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 XIAPP98170 497 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 CDK16Q00536 496 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 NFATC2Q13469 925 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 POU6F1Q14863 301 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 INSCQ1MX18 579 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 SKIDA1Q1XH10 827 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 GPR33Q49SQ1 333 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 PERM1Q5SV97 790 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 CERCAMQ5T4B2 595 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms