RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TXNDC5Q8NBS9 432 aaKnown RBP12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ARRDC3Q96B67 414 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 PTERQ96BW5 349 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 FAM136AQ96C01 138 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 PDLIM5Q96HC4 596 aaKnown RBP12.36□□□□□ -0.43
SHMT2-233ENST00000557529 CNDP1Q96KN2 507 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 LRRC37BQ96QE4 947 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 PANX3Q96QZ0 392 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 BOCQ9BWV1 1114 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 SPATA16Q9BXB7 569 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ILKAPQ9H0C8 392 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ZNF395Q9H8N7 513 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-233ENST00000557529 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 ABCF3Q9NUQ8 709 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 KLHL42Q9P2K6 505 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 SARDHQ9UL12 918 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-233ENST00000557529 RAP2CQ9Y3L5 183 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 STON1Q9Y6Q2 735 aa12.36□□□□□ -0.43
SHMT2-233ENST00000557529 CFAP99D6REC4 459 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 AREL1O15033 823 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 RNASEH1O60930 286 aaKnown RBP12.35□□□□□ -0.43
SHMT2-233ENST00000557529 KERAO60938 352 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 KITP10721 976 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 ADRB3P13945 408 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 GALK1P51570 392 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 NAA20P61599 178 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 ACOX1Q15067 660 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 TTLL9Q3SXZ7 439 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 POM121L1PQ3SYA9 428 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 SPDYAQ5MJ70 313 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 GPRC6AQ5T6X5 926 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 LIPIQ6XZB0 460 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 RFLNAQ6ZTI6 216 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 Q6ZVL8 140 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 ERN2Q76MJ5 926 aaKnown RBP12.35□□□□□ -0.43
SHMT2-233ENST00000557529 CYP2U1Q7Z449 544 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 TECPR1Q7Z6L1 1165 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 KIRREL3Q8IZU9 778 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 CCNYL1Q8N7R7 359 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 GIMAP7Q8NHV1 300 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 RAB7BQ96AH8 199 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 LINGO1Q96FE5 620 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 DCUN1D1Q96GG9 259 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 ATOH8Q96SQ7 321 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 GAS2L1Q99501 681 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-233ENST00000557529 TRMOQ9BU70 441 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 HDAC8Q9BY41 377 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 ACTR5Q9H9F9 607 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-233ENST00000557529 SARS2Q9NP81 518 aaKnown RBP12.35□□□□□ -0.43
SHMT2-233ENST00000557529 TRPV5Q9NQA5 729 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 LATS2Q9NRM7 1088 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 CACNA2D2Q9NY47 1150 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 MARCOQ9UEW3 520 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-233ENST00000557529 HAO1Q9UJM8 370 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 HCN2Q9UL51 889 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 RNF112Q9ULX5 631 aa12.35□□□□□ -0.43
SHMT2-233ENST00000557529 MTF2Q9Y483 593 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-233ENST00000557529 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 WNT9AO14904 365 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 AP2A2O94973 939 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 TSPAN12O95859 305 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 OR56A5P0C7T3 313 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 ALOX15P16050 662 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-233ENST00000557529 IMPDH1P20839 514 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 DGKAP23743 735 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 ARRB2P32121 409 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 CA5AP35218 305 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 ETV3P41162 512 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 PSMD8P48556 350 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 LIG3P49916 1009 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 AQP5P55064 265 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 ZBTB16Q05516 673 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 OR4D1Q15615 310 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 TMEM52BQ4KMG9 183 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 ARL13AQ5H913 290 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-233ENST00000557529 HENMT1Q5T8I9 393 aaKnown RBP12.34□□□□□ -0.43
SHMT2-233ENST00000557529 ZNF765Q7L2R6 523 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 CPNE9Q8IYJ1 553 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 CHPFQ8IZ52 775 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 FITM2Q8N6M3 262 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 ZNF513Q8N8E2 541 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-233ENST00000557529 KCNV2Q8TDN2 545 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 L3HYPDHQ96EM0 354 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 COQ10AQ96MF6 247 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 ACOX2Q99424 681 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 SLC30A3Q99726 388 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 EML4Q9HC35 981 aaKnown RBP12.34□□□□□ -0.43
SHMT2-233ENST00000557529 SPATS2LQ9NUQ6 558 aaKnown RBP12.34□□□□□ -0.43
SHMT2-233ENST00000557529 DNAJC28Q9NX36 388 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 GALPQ9UBC7 116 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 HEY2Q9UBP5 337 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 CD84Q9UIB8 345 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 PRSS21Q9Y6M0 314 aa12.34□□□□□ -0.43
SHMT2-233ENST00000557529 NEMP2A6NFY4 417 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 IQCF5A8MTL0 148 aa12.33□□□□□ -0.44
SHMT2-233ENST00000557529 SPECC1L-ADORA2AF8WAN1 911 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms