RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 KAZNQ674X7 775 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 ARHGAP17Q68EM7 881 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 CNNM4Q6P4Q7 775 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 TRMT10BQ6PF06 316 aaKnown RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 SLC30A9Q6PML9 568 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 LRRC31Q6UY01 552 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 Q6ZSR6 202 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 TUBA1AQ71U36 451 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 ABI3BPQ7Z7G0 1075 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 HORMAD1Q86X24 394 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 WDR75Q8IWA0 830 aaKnown RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 SLC7A5P1Q8MH63 180 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 CARNMT1Q8N4J0 409 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 CCDC89Q8N998 374 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 TP53I13Q8NBR0 393 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 MSANTD4Q8NCY6 345 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 ZNF564Q8TBZ8 553 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 SUN5Q8TC36 379 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 ACMSDQ8TDX5 336 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 TMEM174Q8WUU8 243 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 OR8D1Q8WZ84 308 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 NDRG1Q92597 394 aaKnown RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 NAT6Q93015 286 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 RELTQ969Z4 430 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 ERP27Q96DN0 273 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 TBC1D31Q96DN5 1066 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 CABS1Q96KC9 395 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 RPL10LQ96L21 214 aaKnown RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 IL12RB2Q99665 862 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 CALN1Q9BXU9 219 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 ULBP1Q9BZM6 244 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 IMPG2Q9BZV3 1241 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 BRD8Q9H0E9 1235 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 ADNPQ9H2P0 1102 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 CUEDC2Q9H467 287 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 APOBEC3GQ9HC16 384 aaKnown RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 PREBQ9HCU5 417 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 RIC8BQ9NVN3 520 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 DMAC2Q9NW81 257 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 DNAJC28Q9NX36 388 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 IPO11Q9UI26 975 aaKnown RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 PAIP2BQ9ULR5 123 aaKnown RBP4.94□□□□□ -1.62
ATXN3-247ENST00000557311 TMED5Q9Y3A6 229 aa4.94□□□□□ -1.62
ATXN3-247ENST00000557311 A0A087X0B3 334 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 PMS2P1A4D2B8 440 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 SH3D21A4FU49 640 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 A6NNZ2 444 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 YJEFN3A6XGL0 299 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 E7ENQ6 273 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 C1QTNF3-AMACRE9PGA6 284 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 H0Y3Z8 333 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 XPO1O14980 1071 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 MCF2LO15068 1137 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 ALOX15BO15296 676 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 AQP9O43315 295 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 MSI1O43347 362 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 LUC7L3O95232 432 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 IGLV3-27P01718 113 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 FESP07332 822 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 TROVE2P10155 538 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 RBP3P10745 1247 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 LIPCP11150 499 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 EZRP15311 586 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 ANK1P16157 1881 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 PRLRP16471 622 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 ZNF18P17022 549 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 HNRNPA2B1P22626 353 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 UGT1A5P35504 534 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 CASRP41180 1078 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 TBX4P57082 545 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 ROR2Q01974 943 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 DYNC1I2Q13409 638 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 CUL3Q13618 768 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 SPIDRQ14159 915 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 MYBPC3Q14896 1274 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 CLCA4Q14CN2 919 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 NAA25Q14CX7 972 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 SLC39A14Q15043 492 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 LONRF2Q1L5Z9 754 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 SKIDA1Q1XH10 827 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 ZNF284Q2VY69 593 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 ACCSLQ4AC99 568 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 DCAF6Q58WW2 860 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 MS4A13Q5J8X5 152 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 SH2D4BQ5SQS7 431 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 AGBL4Q5VU57 503 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 THOC7Q6I9Y2 204 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 NADSYN1Q6IA69 706 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 MSANTD2Q6P1R3 559 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 GUSBP11Q6P575 273 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 ARHGAP36Q6ZRI8 547 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 CLEC17AQ6ZS10 378 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 UNC13DQ70J99 1090 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 RAB11FIP2Q7L804 512 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 BHLHA9Q7RTU4 235 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 NANOGNBQ7Z5D8 188 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 PTRH1Q86Y79 214 aaKnown RBP4.93□□□□□ -1.62
ATXN3-247ENST00000557311 CCDC170Q8IYT3 715 aa4.93□□□□□ -1.62
ATXN3-247ENST00000557311 APCDD1Q8J025 514 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms