RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CLEC4GQ6UXB4 293 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 SLC36A4Q6YBV0 504 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 PXKQ7Z7A4 578 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 TRPT1Q86TN4 253 aaKnown RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 ADSSL1Q8N142 457 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 AGBL3Q8NEM8 1001 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 KCNG4Q8TDN1 519 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 FCAMRQ8WWV6 532 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 KIF1BPQ96EK5 621 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 PIP5K1AQ99755 562 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 CHCHD6Q9BRQ6 235 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 STRA6Q9BX79 667 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 RANBP17Q9H2T7 1088 aaKnown RBP3.01□□□□□ -1.93
SCFD1-218ENST00000556256 PLEKHA4Q9H4M7 779 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 SCPEP1Q9HB40 452 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 PCDHB16Q9NRJ7 776 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 TBC1D22BQ9NU19 505 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 BABAM1Q9NWV8 329 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 CAPN7Q9Y6W3 813 aa3.01□□□□□ -1.93
SCFD1-218ENST00000556256 KIAA1210Q9ULL0 1709 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 CTAGE9A4FU28 777 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 GOLGA6L9A6NEM1 432 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 TCERG1O14776 1098 aaKnown RBP3□□□□□ -1.93
SCFD1-218ENST00000556256 KLK8O60259 260 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 CIDEAO60543 219 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 SEC14L2O76054 403 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 CAVIN2O95810 425 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 MLYCDO95822 493 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 IGHV4-39P01824 125 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 CTAGE8P0CG41 777 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 SLC2A4P14672 509 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 GATA2P23769 480 aaPredicted RBP3□□□□□ -1.93
SCFD1-218ENST00000556256 EIF2S3P41091 472 aaKnown RBP3□□□□□ -1.93
SCFD1-218ENST00000556256 GABRB2P47870 512 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 SLC8A3P57103 927 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 RPS3AP61247 264 aaKnown RBP3□□□□□ -1.93
SCFD1-218ENST00000556256 PDE1BQ01064 536 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 ITGADQ13349 1161 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 CCDC96Q2M329 555 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 HAUS3Q68CZ6 603 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 ANKRD54Q6NXT1 300 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 CDC73Q6P1J9 531 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 ZNF790Q6PG37 636 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 SLC46A3Q7Z3Q1 461 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 TBC1D26Q86UD7 250 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 GPAT4Q86UL3 456 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 CTAGE4Q8IX94 777 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 DSELQ8IZU8 1212 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 NGEFQ8N5V2 710 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 ETNPPLQ8TBG4 499 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 MOCOSQ96EN8 888 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 ITPAQ9BY32 194 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 MUC13Q9H3R2 512 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 SMYD2Q9NRG4 433 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 CACNG5Q9UF02 275 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 RCOR1Q9UKL0 485 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 INTS6Q9UL03 887 aaKnown RBP3□□□□□ -1.93
SCFD1-218ENST00000556256 A4GNTQ9UNA3 340 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 DLGAP4Q9Y2H0 992 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 SCINQ9Y6U3 715 aa3□□□□□ -1.93
SCFD1-218ENST00000556256 PAGE4O60829 102 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 PTP4A3O75365 173 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 SEC31AO94979 1220 aaKnown RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 EGFP01133 1207 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 TFP02787 698 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 HOXB5P09067 269 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 HSPA1AP0DMV8 641 aaKnown RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 HSPA1BP0DMV9 641 aaKnown RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 G6PDP11413 515 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 AGAP20933 346 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 POU1F1P28069 291 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 TM4SF1P30408 202 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 MAPK4P31152 587 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 OLR1P78380 273 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 SETQ01105 290 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 NEXNQ0ZGT2 675 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 GRIK3Q13003 919 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 DCTN2Q13561 401 aaKnown RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 EIF4A2Q14240 407 aaKnown RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 GSTA3Q16772 222 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 UGP2Q16851 508 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 ALG11Q2TAA5 492 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 FAM171BQ6P995 826 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 C4orf50Q6ZRC1 276 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 MTSS1LQ765P7 747 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 TAOK1Q7L7X3 1001 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 DHX40Q8IX18 779 aaKnown RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 CNTROBQ8N137 903 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 FBXL16Q8N461 479 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 BMPERQ8N8U9 685 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 MAP7D2Q96T17 732 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 PDCL3Q9H2J4 239 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 KCNN2Q9H2S1 579 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 ESRP2Q9H6T0 727 aaKnown RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 ABI3Q9P2A4 366 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 TP53TG3Q9ULZ0 132 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 CARD8Q9Y2G2 431 aa2.99□□□□□ -1.93
SCFD1-218ENST00000556256 MRPS28Q9Y2Q9 187 aaKnown RBP2.99□□□□□ -1.93
SCFD1-218ENST00000556256 DCXO43602 365 aa2.98□□□□□ -1.93
SCFD1-218ENST00000556256 DOK2O60496 412 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms