RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 FCRL3Q96P31 734 aaPredicted RBP11.7□□□□□ -0.54
VRK1-204ENST00000555351 HEMGNQ9BXL5 484 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 LACRTQ9GZZ8 138 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 WASH6PQ9NQA3 447 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 UBP1Q9NZI7 540 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 IL17CQ9P0M4 197 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 TBC1D29Q9UFV1 150 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 RSPH14Q9UHP6 348 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 FEZ2Q9UHY8 353 aaPredicted RBP11.7□□□□□ -0.54
VRK1-204ENST00000555351 ATXN7L1Q9ULK2 861 aaPredicted RBP11.7□□□□□ -0.54
VRK1-204ENST00000555351 PLEKHM1Q9Y4G2 1056 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 LOXL2Q9Y4K0 774 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 SPO11Q9Y5K1 396 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 DUSP10Q9Y6W6 482 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 CELSR3Q9NYQ7 3312 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 IGHV5-10-1A0A0J9YXX1 117 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 GRID2IPA4D2P6 1211 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 KLHL33A6NCF5 533 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 PRR19A6NJB7 356 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 KLK10O43240 276 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 DUX1O43812 170 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 RBP3P10745 1247 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 ZNF8P17098 575 aaPredicted RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 XRCC1P18887 633 aaPredicted RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 RBL1P28749 1068 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 SLC5A2P31639 672 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 EIF3EP60228 445 aaKnown RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 PDE1BQ01064 536 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 OTUD4Q01804 1114 aaKnown RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 RHDQ02161 417 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 HHEXQ03014 270 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 ITGA9Q13797 1035 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 PRPSAP1Q14558 356 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 SOWAHCQ53LP3 525 aaPredicted RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 PHF19Q5T6S3 580 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 TMEM164Q5U3C3 297 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 AGAP9Q5VTM2 703 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 TMEM71Q6P5X7 295 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 RANBP10Q6VN20 620 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 ZNF574Q6ZN55 896 aaPredicted RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 B4GALNT4Q76KP1 1039 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 TMPRSS9Q7Z410 1059 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 LRRTM4Q86VH4 590 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 KLHDC8BQ8IXV7 354 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 RNF10Q8N5U6 811 aaKnown RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 UBL4BQ8N7F7 174 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 OR10G6Q8NH81 332 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 LRRC45Q96CN5 670 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 SLC38A3Q99624 504 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 FSD1LQ9BXM9 530 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 ZCCHC2Q9C0B9 1178 aaKnown RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 OR2AG1Q9H205 316 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 SEMA6CQ9H3T2 930 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 IL26Q9NPH9 171 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 KCNK4Q9NYG8 393 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 AMFRQ9UKV5 643 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 PKP3Q9Y446 797 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 PCDHGA3Q9Y5H0 932 aa11.69□□□□□ -0.54
VRK1-204ENST00000555351 PCYT1BQ9Y5K3 369 aaPredicted RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 DNMT3AQ9Y6K1 912 aaPredicted RBP11.69□□□□□ -0.54
VRK1-204ENST00000555351 PMS2P1A4D2B8 440 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 GOLGA6L9A6NEM1 432 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 C5orf60A6NFR6 353 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 LILRA5A6NI73 299 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 GOLGA6L6A8MZA4 724 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 AURKAO14965 403 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ATXN7O15265 892 aaPredicted RBP11.68□□□□□ -0.54
VRK1-204ENST00000555351 CDK14O94921 469 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 EML2O95834 649 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 THRAP10827 490 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 LIPCP11150 499 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ACP5P13686 325 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ZNF7P17097 686 aaPredicted RBP11.68□□□□□ -0.54
VRK1-204ENST00000555351 VCLP18206 1134 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ADRA1AP35348 466 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 SPAM1P38567 509 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 VAC14Q08AM6 782 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 CLN3Q13286 438 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 C16orf72Q14CZ0 275 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 LLGL1Q15334 1064 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 AMZ1Q400G9 498 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ATP13A5Q4VNC0 1218 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ANKRD20A2Q5SQ80 823 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 LDLRAP1Q5SW96 308 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ANKRD20A1Q5TYW2 823 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ANKRD20A3Q5VUR7 823 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ALS2CLQ60I27 953 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 FOXR1Q6PIV2 292 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ABRAXAS1Q6UWZ7 409 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 PEX26Q7Z412 305 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 GLT6D1Q7Z4J2 308 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 RBM12BQ8IXT5 1001 aaKnown RBP11.68□□□□□ -0.54
VRK1-204ENST00000555351 AGBL5Q8NDL9 886 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ACRBPQ8NEB7 543 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 CCDC112Q8NEF3 446 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 IPMKQ8NFU5 416 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ALG3Q92685 438 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 CRELD1Q96HD1 420 aa11.68□□□□□ -0.54
VRK1-204ENST00000555351 ZNF514Q96K75 400 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms