RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 GAREM1Q9H706 876 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 UGT1A7Q9HAW7 530 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 UGT1A10Q9HAW8 530 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 UGT1A8Q9HAW9 530 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 IL26Q9NPH9 171 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 MED4Q9NPJ6 270 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 FSCN3Q9NQT6 498 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 TREX1Q9NSU2 369 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 NLE1Q9NVX2 485 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-218ENST00000555213 DNAJC28Q9NX36 388 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 VPS18Q9P253 973 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 CTNNAL1Q9UBT7 734 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 FETUBQ9UGM5 382 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 LGALS13Q9UHV8 139 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 RIMKLBQ9ULI2 386 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 KCTD3Q9Y597 815 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 SLC30A1Q9Y6M5 507 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 GON4LQ3T8J9 2241 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 MYLKQ15746 1914 aa10.82□□□□□ -0.68
SHMT2-218ENST00000555213 RIF1Q5UIP0 2472 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 TLDC2A0PJX2 215 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 HMX2A2RU54 273 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 TNFRSF10CO14798 259 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 INPP4BO15327 924 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 SPAG6O75602 509 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 SRP72O76094 671 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 USP1O94782 785 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 RASGRP1O95267 797 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 SOD1P00441 154 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 ZNF883P0CG24 379 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 NME1P15531 152 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 PAMP19021 973 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 ARNTP27540 789 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 ARCN1P48444 511 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 HNRNPKP61978 463 aaKnown RBP eCLIP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 PRAMEP78395 509 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 TMPRSS15P98073 1019 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 FOXK2Q01167 660 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 BNC1Q01954 994 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 PPARDQ03181 441 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 GTF2H3Q13889 308 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 FZD2Q14332 565 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 CRYMQ14894 314 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 ZNF423Q2M1K9 1284 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 KRT71Q3SY84 523 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 AGBL2Q5U5Z8 902 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 DOK6Q6PKX4 331 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 AFTPHQ6ULP2 937 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 ENPP7Q6UWV6 458 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 KDM7AQ6ZMT4 941 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 KIAA2013Q8IYS2 634 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 OR56A4Q8NGH8 313 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 OR13C4Q8NGS5 318 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 GSDMBQ8TAX9 411 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 GDAP1Q8TB36 358 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 NETO1Q8TDF5 533 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 BTN2A2Q8WVV5 523 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 GLYATL1Q969I3 302 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 FUBP1Q96AE4 644 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 DNAJC1Q96KC8 554 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 ATP6V1G3Q96LB4 118 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 VPS35Q96QK1 796 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 NAT9Q9BTE0 207 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 MCMBPQ9BTE3 642 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 MRM3Q9HC36 420 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 SMOXQ9NWM0 555 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 SLC2A6Q9UGQ3 507 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 APOBEC3BQ9UH17 382 aaKnown RBP10.81□□□□□ -0.68
SHMT2-218ENST00000555213 FKBPLQ9UIM3 349 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 CRLS1Q9UJA2 301 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 RPS6KL1Q9Y6S9 549 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 GVINP1Q7Z2Y8 2422 aa10.81□□□□□ -0.68
SHMT2-218ENST00000555213 CACNA1EQ15878 2313 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 FAM186AA6NE01 2351 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 A0A1B0GTQ1 180 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 CCDC78A2IDD5 438 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 FADS2P1A8MWK0 482 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 GPR89AB7ZAQ6 455 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 CFAP99D6REC4 459 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 GOLGA8KD6RF30 607 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 POC1B-GALNT4F8VUJ3 575 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 FAM155BO75949 473 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SLC25A14O95258 325 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 ASMTLO95671 621 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 CSF2P04141 144 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 MYZAPP0CAP1 466 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 GPR89BP0CG08 455 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 RALBP11234 206 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 CREB1P16220 341 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 JUNDP17535 347 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SDHBP21912 280 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 TGM1P22735 817 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 EPHA8P29322 1005 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 OAS2P29728 719 aaKnown RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 AKT1P31749 480 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 MC4RP32245 332 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms