RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SNX20Q7Z614 316 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 CLDN19Q8N6F1 224 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 ZNF398Q8TD17 642 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 LPGAT1Q92604 370 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 ELMO2Q96JJ3 720 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 PLEKHG4BQ96PX9 1271 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 GPR22Q99680 433 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 PCMTD2Q9NV79 361 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 GALPQ9UBC7 116 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 CRLS1Q9UJA2 301 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 APPL1Q9UKG1 709 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 PNMA8BQ9ULN7 279 aaPredicted RBP10.67□□□□□ -0.7
TDP1-211ENST00000555178 IQCF5A8MTL0 148 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SCAMP1O15126 338 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 FUCA1P04066 466 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 ITGALP20701 1170 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 NFKBIAP25963 317 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 FMO4P31512 558 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SPRP35270 261 aaPredicted RBP10.66□□□□□ -0.7
TDP1-211ENST00000555178 PTGER3P43115 390 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SERPINB9P50453 376 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 ATP1A2P50993 1020 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SUOXP51687 545 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 CDKN2DP55273 166 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 RPS21P63220 83 aaKnown RBP10.66□□□□□ -0.7
TDP1-211ENST00000555178 IRF9Q00978 393 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 TIAL1Q01085 375 aaKnown RBP eCLIP10.66□□□□□ -0.7
TDP1-211ENST00000555178 PDE1CQ14123 709 aaPredicted RBP10.66□□□□□ -0.7
TDP1-211ENST00000555178 INPP5AQ14642 412 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 CDHR3Q6ZTQ4 885 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 KIAA0408Q6ZU52 694 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 BMP8AQ7Z5Y6 402 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 MDM1Q8TC05 714 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SGSM3Q96HU1 749 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 BMFQ96LC9 184 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 UNKQ9C0B0 810 aaKnown RBP10.66□□□□□ -0.7
TDP1-211ENST00000555178 PREBQ9HCU5 417 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 MLXIPLQ9NP71 852 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SNX15Q9NRS6 342 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 NSMCE4AQ9NXX6 385 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 TRBV5-4A0A0C4DH59 114 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 AGAP14A8MT82 685 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 PSMD11O00231 422 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 LATO43561 262 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 MT-ND3P03897 115 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 NR1D1P20393 614 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 ACRV1P26436 265 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 POLD2P49005 469 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 TAS2R39P59534 338 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 CTSL3PQ5NE16 218 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 KIAA0895LQ68EN5 471 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 NAPRTQ6XQN6 538 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SDCCAG8Q86SQ7 713 aaPredicted RBP10.66□□□□□ -0.7
TDP1-211ENST00000555178 CROCCP2Q86T23 111 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 NXPE1Q8N323 547 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 BIRC8Q96P09 236 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SELENOSQ9BQE4 189 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 SGK2Q9HBY8 427 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 MED16Q9Y2X0 877 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.66□□□□□ -0.7
TDP1-211ENST00000555178 TMEM98Q9Y2Y6 226 aa10.66□□□□□ -0.7
TDP1-211ENST00000555178 GPR179Q6PRD1 2367 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 SGTAO43765 313 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 NIPSNAP2O75323 286 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 NDUFS3O75489 264 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 BRAFP15056 766 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 DCDC1P59894 354 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 RPL6Q02878 288 aaKnown RBP10.65□□□□□ -0.7
TDP1-211ENST00000555178 USP10Q14694 798 aaKnown RBP10.65□□□□□ -0.7
TDP1-211ENST00000555178 LRRC14Q15048 493 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 GPRC6AQ5T6X5 926 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 HECTD2Q5U5R9 776 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 RAET1GQ6H3X3 334 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 KIAA1161Q6NSJ0 714 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 PNCKQ6P2M8 343 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 GCNT7Q6ZNI0 430 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 DET1Q7L5Y6 550 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 CYP2U1Q7Z449 544 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 TRIM69Q86WT6 500 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 KRT222Q8N1A0 295 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 SPATA6LQ8N4H0 392 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 LKAAEAR1Q8TD35 194 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 SNX19Q92543 992 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 SLC13A1Q9BZW2 595 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 ZNF358Q9NW07 568 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 PRKAB1Q9Y478 270 aa10.65□□□□□ -0.7
TDP1-211ENST00000555178 ATXN2Q99700 1313 aaKnown RBP10.65□□□□□ -0.7
TDP1-211ENST00000555178 ARHGEF17Q96PE2 2063 aaPredicted RBP10.65□□□□□ -0.7
TDP1-211ENST00000555178 LRRC72A6NJI9 287 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 ZNF217O75362 1048 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 ITGB6P18564 788 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 TTPAP49638 278 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 SGCGQ13326 291 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 SETMARQ53H47 684 aaPredicted RBP10.65□□□□□ -0.71
TDP1-211ENST00000555178 TAOK1Q7L7X3 1001 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 GALNT7Q86SF2 657 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 HEATR4Q86WZ0 1026 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 LMNTD2Q8IXW0 634 aa10.65□□□□□ -0.71
TDP1-211ENST00000555178 PLD6Q8N2A8 252 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms