RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 PDCD6IPQ8WUM4 868 aaKnown RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 THTPAQ9BU02 230 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 TPSD1Q9BZJ3 242 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 DRC3Q9H069 523 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 NT5MQ9NPB1 228 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 MRGBPQ9NV56 204 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 RBM22Q9NW64 420 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHOX-204ENST00000554971 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 EVLQ9UI08 416 aaPredicted RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 RAP2CQ9Y3L5 183 aa17.27■□□□□ 0.36
SHOX-204ENST00000554971 RIF1Q5UIP0 2472 aaKnown RBP17.27■□□□□ 0.36
SHOX-204ENST00000554971 GALR2O43603 387 aaPredicted RBP17.27■□□□□ 0.35
SHOX-204ENST00000554971 CCNT2O60583 730 aaKnown RBP17.27■□□□□ 0.35
SHOX-204ENST00000554971 LEFTY1O75610 366 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 KRT36O76013 467 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 HOXA6P31267 233 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 ADRA1AP35348 466 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 SERPINB5P36952 375 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 CPA2P48052 419 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 SNRPD1P62314 119 aaKnown RBP17.27■□□□□ 0.35
SHOX-204ENST00000554971 CSTF1Q05048 431 aaKnown RBP17.27■□□□□ 0.35
SHOX-204ENST00000554971 NSUN2Q08J23 767 aaKnown RBP eCLIP17.27■□□□□ 0.35
SHOX-204ENST00000554971 OLIG2Q13516 323 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 UBAP2LQ14157 1087 aaKnown RBP17.27■□□□□ 0.35
SHOX-204ENST00000554971 LIPMQ5VYY2 423 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 ALG1LQ6GMV1 187 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 LRRC74BQ6ZQY2 392 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 MAVSQ7Z434 540 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 NELL1Q92832 810 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 MIEF2Q96C03 454 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 FAM167BQ9BTA0 163 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 SERGEFQ9UGK8 458 aa17.27■□□□□ 0.35
SHOX-204ENST00000554971 ZFHX2Q9C0A1 2572 aaPredicted RBP17.27■□□□□ 0.35
SHOX-204ENST00000554971 EP300Q09472 2414 aaPredicted RBP17.27■□□□□ 0.35
SHOX-204ENST00000554971 MRPS35P82673 323 aaKnown RBP17.26■□□□□ 0.35
SHOX-204ENST00000554971 BTKQ06187 659 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 PRKAA1Q13131 559 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 CST6Q15828 149 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 MYLK3Q32MK0 819 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 POM121L1PQ3SYA9 428 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 ARSIQ5FYB1 569 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 FRMD1Q8N878 549 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 ACTRT2Q8TDY3 377 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 OR8D1Q8WZ84 308 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 JADE3Q92613 823 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 ZDHHC6Q9H6R6 413 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 COG4Q9H9E3 785 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 ARNT2Q9HBZ2 717 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 IL1RAPL1Q9NZN1 696 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 SLC7A8Q9UHI5 535 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 FBXO4Q9UKT5 387 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 SLC39A10Q9ULF5 831 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 LRCH1Q9Y2L9 728 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 ACOT9Q9Y305 439 aa17.26■□□□□ 0.35
SHOX-204ENST00000554971 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.26■□□□□ 0.35
SHOX-204ENST00000554971 MID1O15344 667 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 IGSF6O95976 241 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 TPH1P17752 444 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 DRD3P35462 400 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 SCNN1BP51168 640 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 USP10Q14694 798 aaKnown RBP17.25■□□□□ 0.35
SHOX-204ENST00000554971 GRM3Q14832 879 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 KIAA0930Q6ICG6 404 aaPredicted RBP17.25■□□□□ 0.35
SHOX-204ENST00000554971 DENND5AQ6IQ26 1287 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 RAPH1Q70E73 1250 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.25■□□□□ 0.35
SHOX-204ENST00000554971 AADATQ8N5Z0 425 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 ARRDC2Q8TBH0 407 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 PIP4K2CQ8TBX8 421 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 CALML6Q8TD86 181 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 STYXQ8WUJ0 223 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 SIPA1Q96FS4 1042 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 CNDP1Q96KN2 507 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 HEPHQ9BQS7 1158 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 FBRSQ9HAH7 460 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 ZNF358Q9NW07 568 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 NMRK1Q9NWW6 199 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 IL36AQ9UHA7 158 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 CORO1CQ9ULV4 474 aaPredicted RBP17.25■□□□□ 0.35
SHOX-204ENST00000554971 TCAF1Q9Y4C2 921 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 THADAQ6YHU6 1953 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 TRPM6Q9BX84 2022 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 LRRK1Q38SD2 2015 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 A0A087X1B8 175 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 A0A088AWK7 358 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 MATN2O00339 956 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 PLK4O00444 970 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 HDAC3O15379 428 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 MAP3K7O43318 606 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 PIGNO95427 931 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 ARRB2P32121 409 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 RECQLP46063 649 aaPredicted RBP17.25■□□□□ 0.35
SHOX-204ENST00000554971 ARCN1P48444 511 aaKnown RBP17.25■□□□□ 0.35
SHOX-204ENST00000554971 PSMD8P48556 350 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 CSNK1DP48730 415 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 C1orf146Q5VVC0 180 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 ZNF776Q68DI1 518 aaPredicted RBP17.25■□□□□ 0.35
SHOX-204ENST00000554971 PGM2L1Q6PCE3 622 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 RANBP10Q6VN20 620 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 RIPOR1Q6ZS17 1223 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms