RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 DDA1Q9BW61 102 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 INTS2Q9H0H0 1204 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 SIK2Q9H0K1 926 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 CDIP1Q9H305 208 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 FAM204AQ9H8W3 233 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 GPN2Q9H9Y4 310 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 MBNL1Q9NR56 388 aaKnown RBP4.85□□□□□ -1.63
ATXN3-229ENST00000554672 DDIT4Q9NX09 232 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 SLC39A1Q9NY26 324 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 ACTR10Q9NZ32 417 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 MTMR6Q9Y217 621 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 HS3ST4Q9Y661 456 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 DGKBQ9Y6T7 804 aa4.85□□□□□ -1.63
ATXN3-229ENST00000554672 USP9YO00507 2555 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 LRRK2Q5S007 2527 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TLN1Q9Y490 2541 aaKnown RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 SYNJ2BP-COX16A0A087WUM0 186 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 IGHV5-10-1A0A0J9YXX1 117 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CXorf51AA0A1B0GTR3 108 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ILVBLA1L0T0 632 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 A1L4Q6 167 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 MROH6A6NGR9 719 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 B4E171 279 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 MKRN2OSH3BPM6 223 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 DUX1O43812 170 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ZMPSTE24O75844 475 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 RHOBTB3O94955 611 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ADCY5O95622 1261 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 POP4O95707 220 aaKnown RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 PLATP00750 562 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 PRKAR1AP10644 381 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TCN2P20062 427 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TNFRSF8P28908 595 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CD1CP29017 333 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ALDH4A1P30038 563 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CSTF2P33240 577 aaKnown RBP eCLIP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 DCTP40126 519 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TSPAN7P41732 249 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 UQCRFS1P47985 274 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ME1P48163 572 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 SERPINH1P50454 418 aaKnown RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 SUOXP51687 545 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 COPB1P53618 953 aaKnown RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 LIMK2P53671 638 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 GFRA1P56159 465 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 OR1D5P58170 312 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 PITX1P78337 314 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CDC20Q12834 499 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 SQSTM1Q13501 440 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 NFATC4Q14934 902 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TAF5Q15542 800 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 MEA1Q16626 185 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 KLHL40Q2TBA0 621 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 MYLK3Q32MK0 819 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 AMZ1Q400G9 498 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 MAP9Q49MG5 647 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CBWD6Q4V339 395 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ALFQ53S48 1182 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CBWD3Q5JTY5 395 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 EFHC1Q5JVL4 640 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ASB18Q6ZVZ8 466 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 MAMDC2Q7Z304 686 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TMPRSS9Q7Z410 1059 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 FAM114A1Q8IWE2 563 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 SRRM1Q8IYB3 904 aaKnown RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CCDC13Q8IYE1 715 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 NLGN4XQ8N0W4 816 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 NLGN4YQ8NFZ3 816 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CPT1CQ8TCG5 803 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 CXorf40AQ8TE69 158 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 WDR92Q96MX6 357 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 NT5C1BQ96P26 610 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 SLC2A13Q96QE2 648 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TEFMQ96QE5 360 aaKnown RBP4.84□□□□□ -1.63
ATXN3-229ENST00000554672 DPYSL5Q9BPU6 564 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 APOOQ9BUR5 198 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 SPRY4Q9C004 299 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TMPRSS5Q9H3S3 457 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 DPEP2Q9H4A9 486 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ZDHHC6Q9H6R6 413 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 WDCPQ9H6R7 721 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 RDH14Q9HBH5 336 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TMEM51Q9NW97 253 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 ASNSD1Q9NWL6 643 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 COX16Q9P0S2 106 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 KLQ9UEF7 1012 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 USP25Q9UHP3 1055 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 PILRAQ9UKJ1 303 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 PCDHA7Q9UN72 937 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 TP53TG5Q9Y2B4 290 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 B3GALT1Q9Y5Z6 326 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 RELNP78509 3460 aa4.84□□□□□ -1.63
ATXN3-229ENST00000554672 BSNQ9UPA5 3926 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 LOC101059948A0A1B0GTJ6 334 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 TCRBV5S2A0A599 114 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 WIPF3A6NGB9 483 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 RHPN2P1A8MT19 583 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 E5RJQ4 531 aa4.83□□□□□ -1.64
ATXN3-229ENST00000554672 K7EM74 188 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms