RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MARS2Q96GW9 593 aaKnown RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 PPP1R13BQ96KQ4 1090 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 MRGPRX1Q96LB2 322 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 SMAD5Q99717 465 aaKnown RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 PRMT1Q99873 361 aaKnown RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 RTKNQ9BST9 563 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 EDEM2Q9BV94 578 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 SLC2A11Q9BYW1 496 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 LHX5Q9H2C1 402 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 HSD3B7Q9H2F3 369 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 TOR3AQ9H497 397 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 POPDC2Q9HBU9 364 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 PLCB1Q9NQ66 1216 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 ANO10Q9NW15 660 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 DKK2Q9UBU2 259 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 GGA2Q9UJY4 613 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 INTS6Q9UL03 887 aaKnown RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 KNL1Q8NG31 2342 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CABIN1Q9Y6J0 2220 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 ATXN2Q99700 1313 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 DOCK4Q8N1I0 1966 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 LNP1A1A4G5 178 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 PIPSLA2A3N6 862 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 PCNX2A6NKB5 2137 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 LGALS16A8MUM7 142 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 KCNU1A8MYU2 1149 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 I6L893 689 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 CAPN9O14815 690 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 HSF2BPO75031 334 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF217O75362 1048 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 GRAP2O75791 330 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 LUC7L3O95232 432 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 MBD3O95983 291 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 MOCS2O96007 188 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 IGLV3-19P01714 112 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 HKR1P10072 659 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 HLA-EP13747 358 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 CHRNB2P17787 502 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 GCSHP23434 173 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 GABRB2P47870 512 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 SLC11A2P49281 568 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 DHPSP49366 369 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 COPB1P53618 953 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 SEC24CP53992 1094 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 FOXI1Q12951 378 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 IL10RAQ13651 578 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 RAPGEF1Q13905 1077 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 STARD3Q14849 445 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 STX1AQ16623 288 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 AASDHQ4L235 1098 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 FSCBQ5H9T9 825 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 STPG1Q5TH74 334 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 LYSMD4Q5XG99 296 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 RAP1GAP2Q684P5 730 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 CXorf57Q6NSI4 855 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 TRNP1Q6NT89 227 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 KIAA1324Q6UXG2 1013 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 SERPINA13PQ6UXR4 307 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 SLC36A4Q6YBV0 504 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 SEM1Q6ZVN7 128 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 LPCAT2Q7L5N7 544 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 SLC26A9Q7LBE3 791 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 BNIPLQ7Z465 357 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 CHSY1Q86X52 802 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 MFN1Q8IWA4 741 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 LGI2Q8N0V4 545 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF557Q8N988 423 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 HJURPQ8NCD3 748 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF397Q8NF99 534 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 OR2T3Q8NH03 318 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 FIBINQ8TAL6 211 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 SLC20A1Q8WUM9 679 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 UCMAQ8WVF2 138 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 TTC17Q96AE7 1141 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 TMA16Q96EY4 203 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 Q96MF0 132 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 NPY6RQ99463 290 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 DDX50Q9BQ39 737 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 TRIM62Q9BVG3 475 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 STK33Q9BYT3 514 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 CIPCQ9C0C6 399 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 C11orf54Q9H0W9 315 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 VPS16Q9H269 839 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 TMEM245Q9H330 911 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 FAM204AQ9H8W3 233 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 CASS4Q9NQ75 786 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 ANLNQ9NQW6 1124 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 TMEM74BQ9NUR3 256 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 ABCB8Q9NUT2 735 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 SYBUQ9NX95 663 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 LIMA1Q9UHB6 759 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 NOCTQ9UK39 431 aaKnown RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 PILRBQ9UKJ0 227 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 EPN1Q9Y6I3 576 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-203ENST00000554636 ADAMTS9Q9P2N4 1935 aa4.26□□□□□ -1.73
VTI1B-203ENST00000554636 CHD5Q8TDI0 1954 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 ITIH6Q6UXX5 1313 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 FAM170AA1A519 330 aa4.25□□□□□ -1.73
VTI1B-203ENST00000554636 TYW5A2RUC4 315 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms