RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 HOXA6P31267 233 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 PTGER3P43115 390 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 LEPRP48357 1165 aaKnown RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 SLC12A2P55011 1212 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 CDK3Q00526 305 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 LDLRAP1Q5SW96 308 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 RBM20Q5T481 1227 aaKnown RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 ADAMTSL4Q6UY14 1074 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 CEP68Q76N32 757 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 LPCAT2Q7L5N7 544 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 BMP8AQ7Z5Y6 402 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 CROCCP2Q86T23 111 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 ZC3HC1Q86WB0 502 aaKnown RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 SLC41A1Q8IVJ1 513 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 RGL4Q8IZJ4 473 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 MAML2Q8IZL2 1156 aaPredicted RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 LPGAT1Q92604 370 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 CENPTQ96BT3 561 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 CCDC97Q96F63 343 aaPredicted RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 VPS35Q96QK1 796 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 KLF6Q99612 283 aaPredicted RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 DHRS4Q9BTZ2 278 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 COL25A1Q9BXS0 654 aaPredicted RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 ZCCHC2Q9C0B9 1178 aaKnown RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 OR2AG1Q9H205 316 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 CAB39LQ9H9S4 337 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 SARS2Q9NP81 518 aaKnown RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 SMOXQ9NWM0 555 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 FETUBQ9UGM5 382 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 EIF2B4Q9UI10 523 aaKnown RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 MOSPD1Q9UJG1 213 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 GNPTGQ9UJJ9 305 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 TMPRSS11EQ9UL52 423 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 TMEM98Q9Y2Y6 226 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 MTO1Q9Y2Z2 717 aaKnown RBP9.67□□□□□ -0.86
CHD8-204ENST00000553622 BPTFQ12830 3046 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 KNL1Q8NG31 2342 aa9.67□□□□□ -0.86
CHD8-204ENST00000553622 TRBV5-4A0A0C4DH59 114 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 CCDC163A0A0D9SF12 145 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 POM121BA6NF01 834 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 OR2AG2A6NM03 316 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 METTL12A8MUP2 240 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 FOXO6A8MYZ6 492 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 E5RI56 91 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 PRAMEF26H0Y7S4 382 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 H0Y8X5 98 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 CACNB4O00305 520 aaPredicted RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 PRMT5O14744 637 aaPredicted RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 LATO43561 262 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 TCEA3O75764 348 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 RHOBTB1O94844 696 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 TRIM16O95361 564 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 MT-ND3P03897 115 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 SNRPAP09012 282 aaKnown RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 TDGF1P13385 188 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 ATP1B2P14415 290 aaPredicted RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 CNTFP26441 200 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 ATP5DP30049 168 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 DHPSP49366 369 aaPredicted RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 THOP1P52888 689 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 LIMK2P53671 638 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 GPS2Q13227 327 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 PDE1CQ14123 709 aaPredicted RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 ITIH4Q14624 930 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 USP10Q14694 798 aaKnown RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 AGERQ15109 404 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 ANGPT1Q15389 498 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 KHDC1Q4VXA5 237 aaKnown RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 CRTC3Q6UUV7 619 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 RAPH1Q70E73 1250 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 TRAPPC5Q8IUR0 188 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 CYP4X1Q8N118 509 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 KRT222Q8N1A0 295 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 RIBC1Q8N443 379 aaPredicted RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 DCLK2Q8N568 766 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 CLDN19Q8N6F1 224 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 DENND6BQ8NEG7 585 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 DDHD1Q8NEL9 900 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 CADM4Q8NFZ8 388 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 DTX3LQ8TDB6 740 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 GAB3Q8WWW8 586 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 ASB12Q8WXK4 309 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 SLC6A18Q96N87 628 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 APOOQ9BUR5 198 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 TMEM109Q9BVC6 243 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 LGR4Q9BXB1 951 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 STMN4Q9H169 189 aaPredicted RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 PCED1AQ9H1Q7 454 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 EBF2Q9HAK2 575 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 FAM8A1Q9UBU6 413 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 TSR3Q9UJK0 312 aaKnown RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 ZNF180Q9UJW8 692 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 FBXO4Q9UKT5 387 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 CNOT6Q9ULM6 557 aaKnown RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 DMTF1Q9Y222 760 aa9.66□□□□□ -0.86
CHD8-204ENST00000553622 OAS3Q9Y6K5 1087 aaKnown RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 PRSS21Q9Y6M0 314 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms