RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 TRBV23OR9-2A0A075B6M9 112 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 IGHV1OR21-1A0A087WYE8 117 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 KIR2DS5A0A0G2JLQ3 304 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 A0A0G2JNG1 304 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 MACROD2A1Z1Q3 448 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 GRID2IPA4D2P6 1211 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 F5H423 210 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 KIR2DS3K7RE56 304 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 HGSO14964 777 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 KMOO15229 486 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 NVLO15381 856 aaKnown RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 VEGFDO43915 354 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 PPFIA2O75334 1257 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 STK10O94804 968 aaKnown RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 RBP3P10745 1247 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 F3P13726 295 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 SLC5A2P31639 672 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 TMPRSS3P57727 454 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 CXADRP78310 365 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 HHEXQ03014 270 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 KIF5AQ12840 1032 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 TRA2AQ13595 282 aaKnown RBP eCLIP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 KIR2DS5Q14953 304 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 SOWAHCQ53LP3 525 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 DARS2Q6PI48 645 aaKnown RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 SLC9B2Q86UD5 537 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 JAMLQ86YT9 394 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 TTC30BQ8N4P2 665 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 UBL4BQ8N7F7 174 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 OR4D9Q8NGE8 314 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 OR10G6Q8NH81 332 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 ALG3Q92685 438 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 AHCYL2Q96HN2 611 aaKnown RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 UBL7Q96S82 380 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 SLC38A3Q99624 504 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 NUDT22Q9BRQ3 303 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 SEMA6CQ9H3T2 930 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.8□□□□□ -0.36
ACTN1-207ENST00000553290 PISDQ9UG56 409 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 ACSL6Q9UKU0 697 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 PKP3Q9Y446 797 aa12.8□□□□□ -0.36
ACTN1-207ENST00000553290 IGHV5-10-1A0A0J9YXX1 117 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 TEX51A0A1B0GUA7 166 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 A6NCN8 305 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 GOLGA6L9A6NEM1 432 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 GOLGA6L6A8MZA4 724 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 MIF4GDA9UHW6 222 aaKnown RBP12.79□□□□□ -0.36
ACTN1-207ENST00000553290 SNX2O60749 519 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 CDK14O94921 469 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 EML2O95834 649 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 PYGMP11217 842 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 HGFP14210 728 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 SPAM1P38567 509 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 CHRNA4P43681 627 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 LIMK2P53671 638 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 INSCQ1MX18 579 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 ATP13A5Q4VNC0 1218 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 ANKRD20A2Q5SQ80 823 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 ZNF648Q5T619 568 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-207ENST00000553290 ANKRD20A1Q5TYW2 823 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 ANKRD20A3Q5VUR7 823 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 ZNF574Q6ZN55 896 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-207ENST00000553290 GLT6D1Q7Z4J2 308 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 LRRTM4Q86VH4 590 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 GDAP1Q8TB36 358 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 BRSK1Q8TDC3 778 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 BLOC1S5Q8TDH9 187 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 PPP1R2P1Q96PQ5 205 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 TIMM29Q9BSF4 260 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-207ENST00000553290 B3GNT4Q9C0J1 378 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 C10orf88Q9H8K7 445 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 IL26Q9NPH9 171 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 KLC4Q9NSK0 619 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 IL17CQ9P0M4 197 aa12.79□□□□□ -0.36
ACTN1-207ENST00000553290 AAR2Q9Y312 384 aaKnown RBP12.79□□□□□ -0.36
ACTN1-207ENST00000553290 KCNN4O15554 427 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 DUX1O43812 170 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 PTMAP06454 111 aaKnown RBP12.78□□□□□ -0.36
ACTN1-207ENST00000553290 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-207ENST00000553290 ZNF7P17097 686 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-207ENST00000553290 ITIH1P19827 911 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-207ENST00000553290 EPHA4P54764 986 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 TMEM115Q12893 351 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-207ENST00000553290 ITGA9Q13797 1035 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 GTF2H3Q13889 308 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 C16orf72Q14CZ0 275 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 TMEM164Q5U3C3 297 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 NKAIN2Q5VXU1 208 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 TMEM71Q6P5X7 295 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 CRTC3Q6UUV7 619 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 RANBP10Q6VN20 620 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
ACTN1-207ENST00000553290 SPC24Q8NBT2 197 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms