RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 C14orf28Q4W4Y0 310 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 GPRC6AQ5T6X5 926 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 TTC27Q6P3X3 843 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 TRAPPC5Q8IUR0 188 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 DDHD1Q8NEL9 900 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 GPR156Q8NFN8 814 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 STYXQ8WUJ0 223 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 CAPZA3Q96KX2 299 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 SPATS2LQ9NUQ6 558 aaKnown RBP18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 WASF3Q9UPY6 502 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 KCNK6Q9Y257 313 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 PLEKHM1Q9Y4G2 1056 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 SAR1BQ9Y6B6 198 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 KNTC1P50748 2209 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 ZNF106Q9H2Y7 1883 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 ZFC3H1O60293 1989 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 CCDC78A2IDD5 438 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 AP3B1O00203 1094 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 KMOO15229 486 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 OPA1O60313 960 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 NOBOXO60393 691 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 VCLP18206 1134 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 MC4RP32245 332 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 TMEM115Q12893 351 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 NFATC2Q13469 925 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 SKIDA1Q1XH10 827 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 PLA2G4EQ3MJ16 856 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 PAPD7Q5XG87 772 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 OGFOD3Q6PK18 319 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 PPHLN1Q8NEY8 458 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 CCDC74AQ96AQ1 378 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 DCUN1D1Q96GG9 259 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 OSGEPL1Q9H4B0 414 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 CASS4Q9NQ75 786 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 NLE1Q9NVX2 485 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 TMPRSS11EQ9UL52 423 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 MSRB2Q9Y3D2 182 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 MYLKQ15746 1914 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 ASXL3Q9C0F0 2248 aa18.25■□□□□ 0.51
PRPF40B-216ENST00000552301 FAM149AA5PLN7 773 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 CFAP99D6REC4 459 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 CCL22O00626 93 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 GAPDHSO14556 408 aaPredicted RBP18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 CHUKO15111 745 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 ECEL1O95672 775 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 RALBP11234 206 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 SLC2A4P14672 509 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 TPSB2P20231 275 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 GRIA1P42261 906 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 PAFAH1B1P43034 410 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 TERF1P54274 439 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 SESN2P58004 480 aaPredicted RBP18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 SARNPP82979 210 aaKnown RBP18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 CDK16Q00536 496 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 INSM1Q01101 510 aaPredicted RBP18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 PPP1R7Q15435 360 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 TPSAB1Q15661 275 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 KHDC1Q4VXA5 237 aaKnown RBP18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 CCDC38Q502W7 563 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 ZRANB3Q5FWF4 1079 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 PERM1Q5SV97 790 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 CERCAMQ5T4B2 595 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 SNX20Q7Z614 316 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 WDR48Q8TAF3 677 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 CCDC3Q9BQI4 270 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 KCND1Q9NSA2 647 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 CLCA2Q9UQC9 943 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 PCYT1BQ9Y5K3 369 aaPredicted RBP18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 PTPRBP23467 1997 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 RP1P56715 2156 aa18.24■□□□□ 0.51
PRPF40B-216ENST00000552301 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 RHPN2P1A8MT19 583 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 ZW10O43264 779 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 SNX2O60749 519 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 GLB1P16278 677 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 ADRA1DP25100 572 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 MAZP56270 477 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 CLDN6P56747 220 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 XIAPP98170 497 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 HLTFQ14527 1009 aaKnown RBP eCLIP18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 GPR33Q49SQ1 333 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 NLRP9Q7RTR0 991 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 TAS2R42Q7RTR8 314 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 C17orf53Q8N3J3 647 aaPredicted RBP18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 HEXDCQ8WVB3 486 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 RANBP9Q96S59 729 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 TIMM29Q9BSF4 260 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 STN1Q9H668 368 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 KLC4Q9NSK0 619 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 BFARQ9NZS9 450 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 DNAJC16Q9Y2G8 782 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 ST14Q9Y5Y6 855 aa18.23■□□□□ 0.51
PRPF40B-216ENST00000552301 TPRP12270 2363 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 H7C0S8 307 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 NUDT21O43809 227 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 MT-CO3P00414 261 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 ZNF7P17097 686 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 CACNG1Q06432 222 aa18.22■□□□□ 0.51
PRPF40B-216ENST00000552301 SPIDRQ14159 915 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms