RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 KLC4Q9NSK0 619 aa16.14■□□□□ 0.17
VPS29-207ENST00000549970 ADGRG1Q9Y653 693 aa16.14■□□□□ 0.17
VPS29-207ENST00000549970 EPN1Q9Y6I3 576 aaPredicted RBP16.14■□□□□ 0.17
VPS29-207ENST00000549970 A6NCN8 305 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 RCCD1A6NED2 376 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 DUX1O43812 170 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 C1QL1O75973 258 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 NDUFA10O95299 355 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 F3P13726 295 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 SLC2A4P14672 509 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 CHRNA4P43681 627 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 MAPK9P45984 424 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 NAP1L1P55209 391 aaKnown RBP16.13■□□□□ 0.17
VPS29-207ENST00000549970 SQSTM1Q13501 440 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 TRA2AQ13595 282 aaKnown RBP eCLIP16.13■□□□□ 0.17
VPS29-207ENST00000549970 PPP2R5EQ16537 467 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 INSCQ1MX18 579 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 CCDC181Q5TID7 509 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 TMEM164Q5U3C3 297 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 TMEM71Q6P5X7 295 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 SLC9B2Q86UD5 537 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 IPMKQ8NFU5 416 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 OXNAD1Q96HP4 312 aaPredicted RBP16.13■□□□□ 0.17
VPS29-207ENST00000549970 MRGPRX2Q96LB1 330 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 PANX2Q96RD6 677 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 FCRL5Q96RD9 977 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 VAT1Q99536 393 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 DPYSL5Q9BPU6 564 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 RBSNQ9H1K0 784 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 C10orf88Q9H8K7 445 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 SARS2Q9NP81 518 aaKnown RBP16.13■□□□□ 0.17
VPS29-207ENST00000549970 PRDM8Q9NQV8 689 aa16.13■□□□□ 0.17
VPS29-207ENST00000549970 KIR2DS5A0A0G2JLQ3 304 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 A0A0G2JNG1 304 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 LOC285095A0A1B0GVY8 99 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 MACROD2A1Z1Q3 448 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 HACD1B0YJ81 288 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 GPR89AB7ZAQ6 455 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 H7C0C1 242 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 KIR2DS3K7RE56 304 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 EFSO43281 561 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 IPO7O95373 1038 aaKnown RBP16.12■□□□□ 0.17
VPS29-207ENST00000549970 GPR89BP0CG08 455 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 FGF3P11487 239 aaPredicted RBP16.12■□□□□ 0.17
VPS29-207ENST00000549970 CSTF2P33240 577 aaKnown RBP eCLIP16.12■□□□□ 0.17
VPS29-207ENST00000549970 ATP5OP48047 213 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 C19orf57Q0VDD7 668 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 KIR2DS5Q14953 304 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 SIRPB2Q5JXA9 342 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 SNAP47Q5SQN1 464 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 BBS12Q6ZW61 710 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 VASH2Q86V25 355 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 LRRTM4Q86VH4 590 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 AGBL5Q8NDL9 886 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 BLOC1S5Q8TDH9 187 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 TTC9Q92623 222 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 PMEPA1Q969W9 287 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 SH3KBP1Q96B97 665 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 MRFAP1L1Q96HT8 127 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 PLEKHG4BQ96PX9 1271 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 CPNE7Q9UBL6 633 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 SLC23A2Q9UGH3 650 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 RSPH14Q9UHP6 348 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 DNAJC16Q9Y2G8 782 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 PCDHB11Q9Y5F2 797 aa16.12■□□□□ 0.17
VPS29-207ENST00000549970 OR5K4A6NMS3 321 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 A8MU76 341 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 APOC4-APOC2K7ER74 178 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 CHUKO15111 745 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 KMOO15229 486 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 CDK14O94921 469 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 EPOP01588 193 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 APOC2P02655 101 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 CD82P27701 267 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 RBL1P28749 1068 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 CTNNA1P35221 906 aaKnown RBP16.11■□□□□ 0.17
VPS29-207ENST00000549970 HMGCLP35914 325 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 MPP3Q13368 585 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 SLC1A5Q15758 541 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 SEPT7Q16181 437 aaKnown RBP16.11■□□□□ 0.17
VPS29-207ENST00000549970 ATP13A5Q4VNC0 1218 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 KHDC1Q4VXA5 237 aaKnown RBP16.11■□□□□ 0.17
VPS29-207ENST00000549970 MANEAQ5SRI9 462 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 FAM129CQ86XR2 697 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 TMTC1Q8IUR5 882 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 TTC30BQ8N4P2 665 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 CCDC112Q8NEF3 446 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 GDAP1Q8TB36 358 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 JPH3Q8WXH2 748 aaPredicted RBP16.11■□□□□ 0.17
VPS29-207ENST00000549970 NCSTNQ92542 709 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 ART4Q93070 314 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 TAAR9Q96RI9 348 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 TBC1D10AQ9BXI6 508 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 TRABDQ9H4I3 376 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 OCIAD1Q9NX40 245 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 TMPRSS11EQ9UL52 423 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 DUSP10Q9Y6W6 482 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 SDK2Q58EX2 2172 aa16.11■□□□□ 0.17
VPS29-207ENST00000549970 EFCAB7A8K855 629 aa16.1■□□□□ 0.17
VPS29-207ENST00000549970 PDZK1P1A8MUH7 402 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms