RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CDKN3Q16667 212 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 HP1BP3Q5SSJ5 553 aaPredicted RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 WDR93Q6P2C0 686 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 LIPIQ6XZB0 460 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 NLRP9Q7RTR0 991 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 ANKMY2Q8IV38 441 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 ZBED8Q8IZ13 594 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 AGGF1Q8N302 714 aaeCLIP12□□□□□ -0.49
HDAC7-226ENST00000547259 SLC25A45Q8N413 288 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 EIF1ADQ8N9N8 165 aaKnown RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 FAM181AQ8N9Y4 354 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 FBXO36Q8NEA4 188 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 MYRIPQ8NFW9 859 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 PTCD2Q8WV60 388 aaKnown RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 LRRC39Q96DD0 335 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 CCDC97Q96F63 343 aaPredicted RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 SIGLEC10Q96LC7 697 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 DPH1Q9BZG8 443 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 MRM3Q9HC36 420 aaKnown RBP12□□□□□ -0.49
HDAC7-226ENST00000547259 SOX13Q9UN79 622 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 COQ6Q9Y2Z9 468 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 PKP3Q9Y446 797 aa12□□□□□ -0.49
HDAC7-226ENST00000547259 ATMQ13315 3056 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 TRIM38O00635 465 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 SCAMP1O15126 338 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 LDB2O43679 373 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 SDC3O75056 442 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 PIAS2O75928 621 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 TM7SF2O76062 418 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 MYBL2P10244 700 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 PGAM1P18669 254 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 HMGCLP35914 325 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 LSSP48449 732 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 ZNF140P52738 457 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-226ENST00000547259 TMPRSS3P57727 454 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 TMPRSS15P98073 1019 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 PTSQ03393 145 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 TLE3Q04726 772 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 FASTKD3Q14CZ7 662 aaKnown RBP11.99□□□□□ -0.49
HDAC7-226ENST00000547259 ZNF284Q2VY69 593 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 TSTD2Q5T7W7 516 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 ARMC3Q5W041 872 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 SEL1L3Q68CR1 1132 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 KDM7AQ6ZMT4 941 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 HSD11B1LQ7Z5J1 315 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 TMC3Q7Z5M5 1100 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 SPACA3Q8IXA5 215 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 OR4K2Q8NGD2 314 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 OR13C4Q8NGS5 318 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 STYXQ8WUJ0 223 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.99□□□□□ -0.49
HDAC7-226ENST00000547259 GLMNQ92990 594 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 ZNF669Q96BR6 464 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-226ENST00000547259 NUS1Q96E22 293 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 CFAP36Q96G28 342 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 CRELD1Q96HD1 420 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 DNAJC1Q96KC8 554 aaKnown RBP11.99□□□□□ -0.49
HDAC7-226ENST00000547259 EBNA1BP2Q99848 306 aaKnown RBP11.99□□□□□ -0.49
HDAC7-226ENST00000547259 NAT9Q9BTE0 207 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 KIFC1Q9BW19 673 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 PARD6BQ9BYG5 372 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 TSPYL1Q9H0U9 437 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 BPIFA1Q9NP55 256 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 CHRAC1Q9NRG0 131 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 THSD1Q9NS62 852 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 RAD18Q9NS91 495 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 CD84Q9UIB8 345 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 ZFR2Q9UPR6 939 aaKnown RBP11.99□□□□□ -0.49
HDAC7-226ENST00000547259 KCTD3Q9Y597 815 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 CSNK1G3Q9Y6M4 447 aa11.99□□□□□ -0.49
HDAC7-226ENST00000547259 MAGEB16A2A368 324 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 IGLON5A6NGN9 336 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 MROH6A6NGR9 719 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 OPA1O60313 960 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 POLBP06746 335 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 TUBBP07437 444 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 NMBRP28336 390 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 ETV3P41162 512 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 MAGEA4P43358 317 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 RABIFP47224 123 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 CLDN6P56747 220 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 SGCGQ13326 291 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 PTPRCAPQ14761 206 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 SKIDA1Q1XH10 827 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 TMEM259Q4ZIN3 620 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 CDCP2Q5VXM1 449 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 ALS2CLQ60I27 953 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 IGF2-ASQ6U949 168 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 ABI3BPQ7Z7G0 1075 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 CCNJLQ8IV13 435 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 WDR48Q8TAF3 677 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 PYROXD1Q8WU10 500 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 BTN2A2Q8WVV5 523 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 KLK6Q92876 244 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 EID2BQ96D98 161 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 DTD2Q96FN9 168 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 C9orf72Q96LT7 481 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 COQ10AQ96MF6 247 aa11.98□□□□□ -0.49
HDAC7-226ENST00000547259 WDR83Q9BRX9 315 aaKnown RBP11.98□□□□□ -0.49
HDAC7-226ENST00000547259 TRIM56Q9BRZ2 755 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms