RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 HTR7P34969 479 aa15.56■□□□□ 0.08
CUX1-211ENST00000546411 SERPINB10P48595 397 aa15.56■□□□□ 0.08
CUX1-211ENST00000546411 MAPKAPK2P49137 400 aa15.56■□□□□ 0.08
CUX1-211ENST00000546411 XKR6Q5GH73 641 aa15.56■□□□□ 0.08
CUX1-211ENST00000546411 RD3Q7Z3Z2 195 aa15.56■□□□□ 0.08
CUX1-211ENST00000546411 MRGPRX2Q96LB1 330 aa15.56■□□□□ 0.08
CUX1-211ENST00000546411 OSBPL11Q9BXB4 747 aa15.56■□□□□ 0.08
CUX1-211ENST00000546411 WDR6Q9NNW5 1121 aaKnown RBP15.56■□□□□ 0.08
CUX1-211ENST00000546411 ECM29Q5VYK3 1845 aa15.56■□□□□ 0.08
CUX1-211ENST00000546411 MYOCOSA0A1B0GUC4 107 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 MAFKO60675 156 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 CATP04040 527 aaKnown RBP15.55■□□□□ 0.08
CUX1-211ENST00000546411 IMPDH1P20839 514 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 UBE3AQ05086 875 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 TXNDC11Q6PKC3 985 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 RNF19BQ6ZMZ0 732 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 GPR180Q86V85 440 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 CILP2Q8IUL8 1156 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 FIBCD1Q8N539 461 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 DDHD1Q8NEL9 900 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 RTP4Q96DX8 246 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 NSUN5Q96P11 429 aaKnown RBP15.55■□□□□ 0.08
CUX1-211ENST00000546411 ACTL7AQ9Y615 435 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 CDK5RAP2Q96SN8 1893 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 ZCWPW2A0A1B0GU75 182 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 PDZK1P1A8MUH7 402 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 RGS5O15539 181 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 CXCL14O95715 111 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 NIPAL4Q0D2K0 466 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 MAPK11Q15759 364 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 SERINC5Q86VE9 423 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 RAB42Q8N4Z0 105 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 OR9Q1Q8NGQ5 310 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 CENPIQ92674 756 aaPredicted RBP15.55■□□□□ 0.08
CUX1-211ENST00000546411 PKP2Q99959 881 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 HOPXQ9BPY8 73 aaPredicted RBP15.55■□□□□ 0.08
CUX1-211ENST00000546411 LRRC42Q9Y546 428 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 HNRNPRO43390 633 aaKnown RBP15.55■□□□□ 0.08
CUX1-211ENST00000546411 BCL10O95999 233 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 PRSS56P0CW18 603 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 CRATP43155 626 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 SLC11A1P49279 550 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 HERVK_113P63132 956 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 ROR2Q01974 943 aaKnown RBP15.55■□□□□ 0.08
CUX1-211ENST00000546411 ERVK-6Q9BXR3 956 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 ADGRE2Q9UHX3 823 aa15.55■□□□□ 0.08
CUX1-211ENST00000546411 RFXANKO14593 260 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 ECI2O75521 394 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 ADGRE1Q14246 886 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 LYSMD3Q7Z3D4 306 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 KCNK13Q9HB14 408 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 CLCA2Q9UQC9 943 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 STK16O75716 305 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 DHRS4L1P0CG22 281 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 DGKQP52824 942 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 USP46P62068 366 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 TNK2Q07912 1038 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 BNIP2Q12982 314 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 FAM9CQ8IZT9 166 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 MS4A4AQ96JQ5 239 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 SNX6Q9UNH7 406 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 SLC45A1Q9Y2W3 748 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 A0A088AWK7 358 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 ZNF487B1APH4 448 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 EPN2O95208 641 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 GJB5O95377 273 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 IL1BP01584 269 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 PRDX6P30041 224 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 POLD2P49005 469 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 RPIAP49247 311 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 PIK3R6Q5UE93 754 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 ERAP2Q6P179 960 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 PHACTR4Q8IZ21 702 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 EEF1AKMT1Q8WVE0 214 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 FEM1CQ96JP0 617 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 WDR83Q9BRX9 315 aaKnown RBP15.54■□□□□ 0.08
CUX1-211ENST00000546411 NUP205Q92621 2012 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 NRAPQ86VF7 1730 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 CCL16O15467 120 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 GNPDA1P46926 289 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 AGTR2P50052 363 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 ZBTB6Q15916 424 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 TRIM16LQ309B1 348 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 C8orf59Q8N0T1 100 aaPredicted RBP15.54■□□□□ 0.08
CUX1-211ENST00000546411 OR10A6Q8NH74 314 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 DTNBP1Q96EV8 351 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 CAPNS2Q96L46 248 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 MFSD1Q9H3U5 465 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 ZBTB26Q9HCK0 441 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 PNPLA3Q9NST1 481 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 SCML2Q9UQR0 700 aa15.54■□□□□ 0.08
CUX1-211ENST00000546411 SMIM31A0A1B0GVY4 71 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 TBC1D3BA6NDS4 549 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 AHCYL1O43865 530 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 DIO3P55073 304 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 FAM174BQ3ZCQ3 159 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 FNDC3BQ53EP0 1204 aaKnown RBP15.53■□□□□ 0.08
CUX1-211ENST00000546411 GALNT5Q7Z7M9 940 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 KHSRPQ92945 711 aaKnown RBP eCLIP15.53■□□□□ 0.083e-6■■■■□ 19.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms