RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 UGT1A4P22310 534 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 UGT1A3P35503 534 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 UGT1A5P35504 534 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 CLCN7P51798 805 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 PTK2BQ14289 1009 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 UGT3A1Q6NUS8 523 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 LILRA6Q6PI73 481 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 SERPINA9Q86WD7 417 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 ZSWIM9Q86XI8 627 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 FIBINQ8TAL6 211 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 P2RY12Q9H244 342 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 ASB8Q9H765 288 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 GEMIN8Q9NWZ8 242 aaKnown RBP16.18■□□□□ 0.18
COL4A1-204ENST00000543140 MAFFQ9ULX9 164 aa16.18■□□□□ 0.18
COL4A1-204ENST00000543140 A0A0J9YYE9 177 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 GAPDHSO14556 408 aaPredicted RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 PRMT5O14744 637 aaPredicted RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 SNX2O60749 519 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 TRBC1P01850 177 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 SNRPB2P08579 225 aaKnown RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 STX5Q13190 355 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 REP15Q6BDI9 236 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 TSPAN33Q86UF1 283 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 ELMOD1Q8N336 334 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 ZNF784Q8NCA9 323 aaPredicted RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 UCMAQ8WVF2 138 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 TUBGCP3Q96CW5 907 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 CIPCQ9C0C6 399 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 IL26Q9NPH9 171 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 ASAH2Q9NR71 780 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 CACNA2D2Q9NY47 1150 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 H3BNX3 289 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 RPS17P08708 135 aaKnown RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 ME2P23368 584 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 PSME3P61289 254 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 MRPS22P82650 360 aaKnown RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 CREMQ03060 361 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 RBBP7Q16576 425 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 PTRHD1Q6GMV3 140 aaKnown RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 SCIMPQ6UWF3 145 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 CPXM2Q8N436 756 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 TMEM199Q8N511 208 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 BHLHE22Q8NFJ8 381 aaPredicted RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 TCEAL4Q96EI5 215 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 SLC45A3Q96JT2 553 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 GCNAQ96QF7 691 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 C17orf80Q9BSJ5 609 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 EIF2B4Q9UI10 523 aaKnown RBP16.17■□□□□ 0.18
COL4A1-204ENST00000543140 LRCH1Q9Y2L9 728 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 PCDHGA7Q9Y5G6 932 aa16.17■□□□□ 0.18
COL4A1-204ENST00000543140 HIDE1A8MVS5 230 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 E7ENX8 843 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 HTRA2O43464 458 aaPredicted RBP16.16■□□□□ 0.18
COL4A1-204ENST00000543140 IGSF6O95976 241 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 ADH1AP07327 375 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 LINC00271P0C7V0 271 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 HLA-FP30511 346 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 ERVFC1P60507 584 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 STX1BP61266 288 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 MAPRE2Q15555 327 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 C18orf21Q32NC0 220 aaPredicted RBP16.16■□□□□ 0.18
COL4A1-204ENST00000543140 CMPK2Q5EBM0 449 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 CCDC149Q6ZUS6 474 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 SYVN1Q86TM6 617 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 FUNDC1Q8IVP5 155 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 RIN3Q8TB24 985 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 GDPD5Q8WTR4 605 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL4A1-204ENST00000543140 TCF25Q9BQ70 676 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 HGH1Q9BTY7 390 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 CLPBQ9H078 707 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 ATP13A3Q9H7F0 1226 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 PCTPQ9UKL6 214 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 ZNF510Q9Y2H8 683 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 PRSS21Q9Y6M0 314 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.16■□□□□ 0.18
COL4A1-204ENST00000543140 EFCAB14O75071 495 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 HGFP14210 728 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 PEX2P28328 305 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 CDC16Q13042 620 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 NFATC2Q13469 925 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 LRP8Q14114 963 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 ADGRG6Q86SQ4 1221 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 TMEM25Q86YD3 366 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 STK40Q8N2I9 435 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 PLEKHG4BQ96PX9 1271 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 ECSITQ9BQ95 431 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 SLC39A3Q9BRY0 314 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 POLG2Q9UHN1 485 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 ZNF225Q9UK10 706 aa16.16■□□□□ 0.18
COL4A1-204ENST00000543140 MRASO14807 208 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 RFPL2O75678 378 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 TRIM16O95361 564 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 CYBBP04839 570 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 BPIP17213 487 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 GPX3P22352 226 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 ARL1P40616 181 aaPredicted RBP16.15■□□□□ 0.18
COL4A1-204ENST00000543140 ADARP55265 1226 aaKnown RBP16.15■□□□□ 0.18
COL4A1-204ENST00000543140 RALGDSQ12967 914 aa16.15■□□□□ 0.18
COL4A1-204ENST00000543140 BLMHQ13867 455 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms