RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 PHYKPLQ8IUZ5 450 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 LRRN4Q8WUT4 740 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 EID2BQ96D98 161 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 TRIM44Q96DX7 344 aaPredicted RBP11.71□□□□□ -0.53
PTPN6-219ENST00000542848 ZNF830Q96NB3 372 aaPredicted RBP11.71□□□□□ -0.53
PTPN6-219ENST00000542848 RNF157Q96PX1 679 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 ZSCAN5AQ9BUG6 496 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 ZFYVE1Q9HBF4 777 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 APMAPQ9HDC9 416 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 PRDM8Q9NQV8 689 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 RAD18Q9NS91 495 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 DTLQ9NZJ0 730 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 CTTNBP2NLQ9P2B4 639 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 NENFQ9UMX5 172 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.53
PTPN6-219ENST00000542848 LRRK2Q5S007 2527 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 CYSRT1A8MQ03 144 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 ZNF487B1APH4 448 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 CHUKO15111 745 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 TOX3O15405 576 aaPredicted RBP11.7□□□□□ -0.54
PTPN6-219ENST00000542848 STK17BO94768 372 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 SLC25A14O95258 325 aaPredicted RBP11.7□□□□□ -0.54
PTPN6-219ENST00000542848 DLGAP3O95886 979 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 C9P02748 559 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 H2AFZP0C0S5 128 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 KDELR1P24390 212 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 MAPK9P45984 424 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 NOP2P46087 812 aaKnown RBP11.7□□□□□ -0.54
PTPN6-219ENST00000542848 DCDC1P59894 354 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 UBE2IP63279 158 aaKnown RBP11.7□□□□□ -0.54
PTPN6-219ENST00000542848 IFI35P80217 286 aaPredicted RBP11.7□□□□□ -0.54
PTPN6-219ENST00000542848 CDC20Q12834 499 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 TMEM26Q6ZUK4 368 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 H2AFVQ71UI9 128 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 KDELC2Q7Z4H8 507 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 TMC3Q7Z5M5 1100 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 PTRH1Q86Y79 214 aaKnown RBP11.7□□□□□ -0.54
PTPN6-219ENST00000542848 CPNE8Q86YQ8 564 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 TRAM1L1Q8N609 369 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 ESX1Q8N693 406 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 CNTD1Q8N815 330 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 C9orf72Q96LT7 481 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 PLEKHG4BQ96PX9 1271 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 SPATA16Q9BXB7 569 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 TBC1D10AQ9BXI6 508 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 OR2AG1Q9H205 316 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 MAGEE1Q9HCI5 957 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 KLC4Q9NSK0 619 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 NFKBIL1Q9UBC1 381 aaPredicted RBP11.7□□□□□ -0.54
PTPN6-219ENST00000542848 KLHL3Q9UH77 587 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 ANAPC2Q9UJX6 822 aa11.7□□□□□ -0.54
PTPN6-219ENST00000542848 MED13Q9UHV7 2174 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 KCNK1O00180 336 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 KMOO15229 486 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 VIPP01282 170 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 PTMAP06454 111 aaKnown RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 ZNF7P17097 686 aaPredicted RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 CASRP41180 1078 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 STAT5AP42229 794 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 GALNT3Q14435 633 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 SLC14A2Q15849 920 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 COLEC12Q5KU26 742 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 ZNF569Q5MCW4 686 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 ZFYVE27Q5T4F4 411 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 NT5DC3Q86UY8 548 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 VSIG1Q86XK7 387 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 UNC5BQ8IZJ1 945 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 GPR26Q8NDV2 337 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 APOBEC4Q8WW27 367 aaKnown RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 CTNNBL1Q8WYA6 563 aaPredicted RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 RAPGEF5Q92565 580 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 GLYATL1Q969I3 302 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 IMP4Q96G21 291 aaKnown RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 TRIB3Q96RU7 358 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 SRPK1Q96SB4 655 aaKnown RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 TIMM29Q9BSF4 260 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 XPO4Q9C0E2 1151 aaKnown RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 ARFGAP3Q9NP61 516 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 SIDT1Q9NXL6 827 aaKnown RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 ZNF624Q9P2J8 865 aaPredicted RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 IMPACTQ9P2X3 320 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 RELNP78509 3460 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 SEC16AO15027 2179 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 RP1L1Q8IWN7 2480 aaPredicted RBP11.69□□□□□ -0.54
PTPN6-219ENST00000542848 SPTBP11277 2137 aa11.69□□□□□ -0.54
PTPN6-219ENST00000542848 TNRC6AQ8NDV7 1962 aaKnown RBP11.68□□□□□ -0.54
PTPN6-219ENST00000542848 PIKFYVEQ9Y2I7 2098 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 PRR19A6NJB7 356 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 VEGFDO43915 354 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 MTA2O94776 668 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 UBXN7O94888 489 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 GYPCP04921 128 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 PRKAR1AP10644 381 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 AMD1P17707 334 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 TCN2P20062 427 aa11.68□□□□□ -0.54
PTPN6-219ENST00000542848 OAS2P29728 719 aaKnown RBP11.68□□□□□ -0.54
PTPN6-219ENST00000542848 HNRNPH3P31942 346 aaKnown RBP11.68□□□□□ -0.54
PTPN6-219ENST00000542848 SLC19A1P41440 591 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms