RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 TSPAN8P19075 237 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 VIPR1P32241 457 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 SERPINB5P36952 375 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 VASPP50552 380 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-204ENST00000539827 PTPN5P54829 565 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 IL2P60568 153 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 PDGFRLQ15198 375 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 PFKFB4Q16877 469 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 GPR33Q49SQ1 333 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 UGT3A1Q6NUS8 523 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 NXPE1Q8N323 547 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 KDM1BQ8NB78 822 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 OR52B2Q96RD2 323 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 NUF2Q9BZD4 464 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 LRMDAQ9H2I8 198 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 NSUN3Q9H649 340 aaKnown RBP22.24■■□□□ 1.15
HOMER3-204ENST00000539827 WDR55Q9H6Y2 383 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-204ENST00000539827 PCDH12Q9NPG4 1184 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 GNPTGQ9UJJ9 305 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.24■■□□□ 1.15
HOMER3-204ENST00000539827 DHRS7Q9Y394 339 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 FIS1Q9Y3D6 152 aa22.24■■□□□ 1.15
HOMER3-204ENST00000539827 CAPN14A8MX76 684 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 PRR5-ARHGAP8B1AHC4 643 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 ECI2O75521 394 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 SUPT7LO94864 414 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 KRT16P08779 473 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 SPINT3P49223 89 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 ARHGAP8P85298 464 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 NFKB2Q00653 900 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 FNDC3BQ53EP0 1204 aaKnown RBP22.23■■□□□ 1.15
HOMER3-204ENST00000539827 TMEM184AQ6ZMB5 413 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 L3HYPDHQ96EM0 354 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 MYADMQ96S97 322 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 OSBPL1AQ9BXW6 950 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 MYO9BQ13459 2157 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 UPK3BL1B0FP48 263 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 UPK3BL2E5RIL1 263 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 SIX3O95343 332 aaPredicted RBP22.23■■□□□ 1.15
HOMER3-204ENST00000539827 TRIM16O95361 564 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 ESRRAP11474 423 aaPredicted RBP22.23■■□□□ 1.15
HOMER3-204ENST00000539827 GFAPP14136 432 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 NCF2P19878 526 aaPredicted RBP22.23■■□□□ 1.15
HOMER3-204ENST00000539827 PDCD2Q16342 344 aaPredicted RBP22.23■■□□□ 1.15
HOMER3-204ENST00000539827 ATP13A5Q4VNC0 1218 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 ZNF805Q5CZA5 627 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 FRMD7Q6ZUT3 714 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 INPP5DQ92835 1189 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 TNFRSF12AQ9NP84 129 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 STK38LQ9Y2H1 464 aa22.23■■□□□ 1.15
HOMER3-204ENST00000539827 TSPAN11A1L157 253 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 RASSF9O75901 435 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 JUNP05412 331 aaKnown RBP22.22■■□□□ 1.15
HOMER3-204ENST00000539827 XPAP23025 273 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-204ENST00000539827 CPA2P48052 419 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 HK2P52789 917 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 FAM219BQ5XKK7 198 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 HSD11B1LQ7Z5J1 315 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 RAB44Q7Z6P3 723 aaPredicted RBP22.22■■□□□ 1.15
HOMER3-204ENST00000539827 CUZD1Q86UP6 607 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 TIFAQ96CG3 184 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 EML4Q9HC35 981 aaKnown RBP22.22■■□□□ 1.15
HOMER3-204ENST00000539827 PKD2L2Q9NZM6 624 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 VTI1BQ9UEU0 232 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 LNPEPQ9UIQ6 1025 aa22.22■■□□□ 1.15
HOMER3-204ENST00000539827 C16orf96A6NNT2 1141 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 E9PBE3 544 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 KLHL41O60662 606 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 SLC25A14O95258 325 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-204ENST00000539827 PTPN4P29074 926 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 RASSF2P50749 326 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 CDH13P55290 713 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 HERVK_113P63132 956 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 ELF3P78545 371 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-204ENST00000539827 FBXO39Q8N4B4 442 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 FUBP1Q96AE4 644 aaKnown RBP22.21■■□□□ 1.15
HOMER3-204ENST00000539827 KXD1Q9BQD3 176 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 ERVK-6Q9BXR3 956 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 ZDHHC3Q9NYG2 299 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 NCF1BA6NI72 391 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-204ENST00000539827 AGAP14A8MT82 685 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 NCF1CA8MVU1 366 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-204ENST00000539827 SLCO1B7G3V0H7 640 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 NCF1P14598 390 aaPredicted RBP22.21■■□□□ 1.15
HOMER3-204ENST00000539827 CALB2P22676 271 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 EPHA3P29320 983 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 FBXO48Q5FWF7 155 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 RINLQ6ZS11 566 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 YAF2Q8IY57 180 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 PLEKHG4BQ96PX9 1271 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 TCF7L2Q9NQB0 619 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 SARDHQ9UL12 918 aa22.21■■□□□ 1.15
HOMER3-204ENST00000539827 ANTXRLA6NF34 631 aa22.2■■□□□ 1.14
HOMER3-204ENST00000539827 UBFD1O14562 309 aaKnown RBP22.2■■□□□ 1.14
HOMER3-204ENST00000539827 RUNX3Q13761 415 aa22.2■■□□□ 1.14
HOMER3-204ENST00000539827 UTP4Q969X6 686 aaKnown RBP22.2■■□□□ 1.14
HOMER3-204ENST00000539827 SPATA16Q9BXB7 569 aa22.2■■□□□ 1.14
HOMER3-204ENST00000539827 TMPRSS11EQ9UL52 423 aa22.2■■□□□ 1.14
HOMER3-204ENST00000539827 PLXNB3Q9ULL4 1909 aa22.2■■□□□ 1.14
HOMER3-204ENST00000539827 KPNA3O00505 521 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms