RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 FECHP22830 423 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 CTNNA1P35221 906 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TNNT3P45378 269 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SRSF6Q13247 344 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 PDPK2PQ6A1A2 396 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 PCSK4Q6UW60 755 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 ZFAND4Q86XD8 727 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 ACRBPQ8NEB7 543 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 OR10G6Q8NH81 332 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 CCNL2Q96S94 520 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SRPK1Q96SB4 655 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 VAT1Q99536 393 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SARS2Q9NP81 518 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SLC23A2Q9UGH3 650 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 RSPH14Q9UHP6 348 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 ACSL6Q9UKU0 697 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TMPRSS11EQ9UL52 423 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 MACROD2A1Z1Q3 448 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 K7ENP7 123 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 APOC4-APOC2K7ER74 178 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 HGSO14964 777 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 IPO7O95373 1038 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 APOC2P02655 101 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 THRAP10827 490 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 F3P13726 295 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 RBL1P28749 1068 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 MAPK9P45984 424 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 GPLD1P80108 840 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SQSTM1Q13501 440 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SLC1A5Q15758 541 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 KHDC1Q4VXA5 237 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TAF1BQ53T94 588 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SNAP47Q5SQN1 464 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 KIAA1614Q5VZ46 1190 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 INO80CQ6PI98 192 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SLC9B2Q86UD5 537 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TTC30BQ8N4P2 665 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 BLOC1S5Q8TDH9 187 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 PMEPA1Q969W9 287 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 LACRTQ9GZZ8 138 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 STN1Q9H668 368 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 DNAJC16Q9Y2G8 782 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 PCDHA3Q9Y5H8 950 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 MGAQ8IWI9 3026 aa18.82■□□□□ 0.6
TNFRSF1A-212ENST00000539372 ERVH48-1M5A8F1 160 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 CHUKO15111 745 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 EFSO43281 561 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 BUD23O43709 281 aaKnown RBP18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 DUX1O43812 170 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 EPOP01588 193 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 LIPCP11150 499 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 FGF3P11487 239 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SLC2A4P14672 509 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 HMGCLP35914 325 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 COPS2P61201 443 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 RHDQ02161 417 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 MPP3Q13368 585 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 XRCC4Q13426 336 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TRA2AQ13595 282 aaKnown RBP eCLIP18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SEPT7Q16181 437 aaKnown RBP18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 INSCQ1MX18 579 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 ATP13A5Q4VNC0 1218 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 AADACL2Q6P093 401 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TMEM71Q6P5X7 295 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 LRRTM4Q86VH4 590 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 GAS2L3Q86XJ1 694 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 GDAP1Q8TB36 358 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SNRNP27Q8WVK2 155 aaKnown RBP18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 PLEKHG4BQ96PX9 1271 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 DPYSL5Q9BPU6 564 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 FAM118BQ9BPY3 351 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 FSD1LQ9BXM9 530 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TRABDQ9H4I3 376 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 SCHIP1Q9P0W5 487 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 CPNE7Q9UBL6 633 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TRHDEQ9UKU6 1024 aa18.81■□□□□ 0.6
TNFRSF1A-212ENST00000539372 KIR2DS5A0A0G2JLQ3 304 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 A0A0G2JNG1 304 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 A8MU76 341 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 GPR89AB7ZAQ6 455 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 KIR2DS3K7RE56 304 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TK2O00142 265 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 KMOO15229 486 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 C1QL1O75973 258 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 CDK14O94921 469 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 AGTP01019 485 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 GPR89BP0CG08 455 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 ZNF7P17097 686 aaPredicted RBP18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 CSTF2P33240 577 aaKnown RBP eCLIP18.8■□□□□ 0.67e-7■□□□□ 8.4
TNFRSF1A-212ENST00000539372 OTUD4Q01804 1114 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 KIR2DS5Q14953 304 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 TMEM164Q5U3C3 297 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 FAM151BQ6UXP7 276 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 GLT6D1Q7Z4J2 308 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 VASH2Q86V25 355 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 ZNF547Q8IVP9 402 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 AGBL5Q8NDL9 886 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 ACTL9Q8TC94 416 aa18.8■□□□□ 0.6
TNFRSF1A-212ENST00000539372 NCSTNQ92542 709 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms